College of Horticulture, Hebei Agricultural University, Baoding 171000, China.
Int J Mol Sci. 2024 Jul 13;25(14):7687. doi: 10.3390/ijms25147687.
The fructose-1,6-bisphosphate aldolase () gene family exists in higher plants, with the genes of this family playing significant roles in plant growth and development, as well as response to abiotic stresses. However, systematic reports on the gene family and its functions in cucumber are lacking. In this study, we identified five cucumber genes, named -, that are distributed randomly across chromosomes. Phylogenetic analyses involving these cucumber FBAs, alongside eight Arabidopsis FBA proteins and eight tomato FBA proteins, were conducted to assess their homology. The CsFBAs were grouped into two clades. We also analyzed the physicochemical properties, motif composition, and gene structure of the cucumber FBAs. This analysis highlighted differences in the physicochemical properties and revealed highly conserved domains within the CsFBA family. Additionally, to explore the evolutionary relationships of the CsFBA family further, we constructed comparative syntenic maps with and tomato, which showed high homology but only one segmental duplication event within the cucumber genome. Expression profiles indicated that the gene family is responsive to various abiotic stresses, including low temperature, heat, and salt. Taken together, the results of this study provide a theoretical foundation for understanding the evolution of and future research into the functional characterization of cucumber FBA genes during plant growth and development.
果糖-1,6-二磷酸醛缩酶(FBA)基因家族存在于高等植物中,该家族的基因在植物生长发育以及应对非生物胁迫方面发挥着重要作用。然而,关于黄瓜中 FBAs 基因家族及其功能的系统报道还很少。在本研究中,我们鉴定了 5 个黄瓜 FBA 基因,分别命名为 - ,它们随机分布在染色体上。通过对这些黄瓜 FBA 与 8 个拟南芥 FBA 蛋白和 8 个番茄 FBA 蛋白进行系统进化分析,评估它们的同源性。CsFBAs 分为两个分支。我们还分析了黄瓜 FBA 的理化性质、基序组成和基因结构。该分析突出了理化性质的差异,并揭示了 CsFBA 家族内高度保守的结构域。此外,为了进一步探讨 CsFBA 家族的进化关系,我们构建了与番茄的比较共线性图谱,结果表明它们在黄瓜基因组中具有高度同源性,但仅有一次片段重复事件。表达谱分析表明,该基因家族对各种非生物胁迫(包括低温、高温和盐胁迫)有响应。综上所述,本研究结果为理解黄瓜 FBA 基因在植物生长发育过程中的进化和功能特征研究提供了理论基础。