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鉴定和验证与血管生成相关的基因重塑肿瘤微环境并抑制胃癌免疫治疗反应。

Identifying and validating angiogenesis-related genes remodeling tumor microenvironment and suppressing immunotherapy response in gastric cancer.

机构信息

Department of Oncology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.

Department of Liver Surgery, Renji Hospital, Shanghai Jiao Tong University School of Medicine, China.

出版信息

Gene. 2024 Nov 30;928:148796. doi: 10.1016/j.gene.2024.148796. Epub 2024 Jul 25.

Abstract

Angiogenesis significantly correlates with tumor microenvironment remodeling and immunotherapy response. Our study aimed to construct a prognostic angiogenesis-related model for gastric cancer. Using public database, a angiogenetic related five-gene (FGF1, GRB14, PAK3, PDGFRA, and PRKD1) model was identified. The top 25 % of patients were defined as high-risk, and the remaining as low-risk. The area under the curve for 1-, 3-, and 5-year overall survival (OS) were 0.646, 0.711, and 0.793, respectively. Survival analysis showed a better 10-year OS in low-risk patients in the construction (HR = 0.57, p = 0.002) and validation cohorts. GO and GSEA revealed that DEGs were enriched in extracellular matrix receptor interactions, dendritic cell antigen processing/presentation regulation, and angiogenesis pathways. CIBERSORT analysis revealed abundant naïve B cells, resting mast cells, resting CD4 memory T cells, M2 macrophages, and monocytes in high-risk subgroups. The TIMER database showed strong positive correlations between PAK3, FGF1, PRKD1, and PDGFRA expression levels and the infiltration of CD4 T cells and macrophages. The IOBR analysis revealed an immunosuppressive environment in the high-risk subgroup. Low-risk patients show a higher response rate to anti-PD1 treatment. TMA showed that FGF1 overexpression was associated with poor prognosis and CD4 T cells and macrophage infiltration. In vivo study based on the 615 mice indicated that inhibiting FGF1 function could suppress tumor growth and enhance anti-PD1 therapeutic efficacy. In summary, we established a five-angiogenesis-related gene model to predict survival outcomes and immunotherapy responses in patients with gastric cancer and identified FGF1 as a prognostic gene and potential target for improving immune treatment.

摘要

血管生成与肿瘤微环境重塑和免疫治疗反应密切相关。我们的研究旨在构建一个用于预测胃癌的预后相关血管生成模型。使用公共数据库,确定了一个与血管生成相关的五个基因(FGF1、GRB14、PAK3、PDGFRA 和 PRKD1)模型。将前 25%的患者定义为高风险,其余为低风险。1、3、5 年总生存期(OS)的曲线下面积分别为 0.646、0.711 和 0.793。生存分析显示,在构建和验证队列中,低风险患者的 10 年 OS 更好(HR=0.57,p=0.002)。GO 和 GSEA 分析显示,DEGs 富集在细胞外基质受体相互作用、树突状细胞抗原处理/呈递调节和血管生成途径中。CIBERSORT 分析显示,高风险亚组中存在丰富的幼稚 B 细胞、静止肥大细胞、静止 CD4 记忆 T 细胞、M2 巨噬细胞和单核细胞。TIMER 数据库显示 PAK3、FGF1、PRKD1 和 PDGFRA 表达水平与 CD4 T 细胞和巨噬细胞浸润之间存在强烈的正相关。IOBR 分析显示高风险亚组存在免疫抑制环境。低风险患者对抗 PD1 治疗的反应率更高。TMA 显示 FGF1 过表达与预后不良和 CD4 T 细胞和巨噬细胞浸润相关。基于 615 只小鼠的体内研究表明,抑制 FGF1 功能可抑制肿瘤生长并增强抗 PD1 治疗效果。总之,我们建立了一个与血管生成相关的五个基因模型,用于预测胃癌患者的生存结果和免疫治疗反应,并确定 FGF1 作为一个预后基因和改善免疫治疗的潜在靶点。

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