Division of Reproductive Sciences in Medicine, Department of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.
Division of Reproductive Sciences in Medicine, Department of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois; Department of Pathology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois; Robert H. Lurie Comprehensive Cancer Center, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.
F S Sci. 2024 Nov;5(4):352-368. doi: 10.1016/j.xfss.2024.07.008. Epub 2024 Jul 27.
To determine if engineered high-mobility group AT-hook 2 (HMGA2) overexpressing uterine primary myometrial cells recapitulate the transcriptional and epigenomic features of HMGA2-subtype leiomyomas.
Isolated primary, "normal" myometrial cells from three patients were engineered to overexpress HMGA2 to determine how HMGA2 establishes transcriptomic and epigenomic features of HMGA2-overexpressing leiomyoma.
Academic research laboratory.
PATIENT(S): Primary myometrial cells were isolated from normal myometrium obtained from three patients undergoing hysterectomy.
INTERVENTION(S): Not applicable.
MAIN OUTCOME MEASURE(S): Determined genome-wide transcriptomic and epigenomic features of engineered HMGA2-overexpressing uterine primary myometrial cells.
RESULT(S): Engineered HMGA2-V5-overexpressing primary myometrial cells approximated the HMGA2 expression level observed in HMGA2-overexpression subtype leiomyoma. High-mobility group AT-hook 2-V5 expression resulted in differential expression of 1,612 genes (false discovery rate [FDR] < 0.05) that were found to be enriched in pathways associated with leiomyoma formation, including extracellular matrix organization. Comparative gene expression analysis between HMGA2-V5 engineered primary cells and HMGA2-overexpression subtype leiomyoma revealed significant overlap of differentially expressed genes. Mechanistically, HMGA2-V5 overexpression resulted in 41,323 regions with differential H3K27ac deposition (FDR < 0.05) and 205,605 regions of altered chromatin accessibility (FDR < 0.05). Transcription factor binding site analysis implicated the AP-1 family of transcription factors.
CONCLUSION(S): High-mobility group AT-hook 2 overexpression induces leiomyoma-like transcriptomic and epigenomic modulations in myometrial cells.
确定工程化高迁移率族 AT 钩 2(HMGA2)过表达子宫原发性平滑肌细胞是否再现 HMGA2 亚型平滑肌瘤的转录组和表观基因组特征。
从 3 名患者中分离出原发性“正常”子宫平滑肌细胞,对其进行工程化改造以过表达 HMGA2,以确定 HMGA2 如何建立 HMGA2 过表达平滑肌瘤的转录组和表观基因组特征。
学术研究实验室。
从因子宫切除术而接受手术的 3 名患者的正常子宫肌层中分离出原发性子宫平滑肌细胞。
不适用。
确定工程化 HMGA2 过表达的子宫原发性平滑肌细胞的全基因组转录组和表观基因组特征。
HMGA2-V5 过表达的工程化原发性平滑肌细胞接近 HMGA2 过表达亚型平滑肌瘤中观察到的 HMGA2 表达水平。高迁移率族 AT 钩 2-V5 表达导致 1612 个基因的差异表达(错误发现率[FDR] <0.05),这些基因被发现富集在与平滑肌瘤形成相关的途径中,包括细胞外基质组织。HMGA2-V5 工程化原发性细胞与 HMGA2 过表达亚型平滑肌瘤之间的比较基因表达分析显示,差异表达基因有显著重叠。从机制上讲,HMGA2-V5 过表达导致 41323 个区域的 H3K27ac 沉积有差异(FDR <0.05),205605 个区域的染色质可及性发生改变(FDR <0.05)。转录因子结合位点分析表明,AP-1 家族转录因子参与其中。
HMGA2 过表达在子宫平滑肌细胞中诱导出平滑肌瘤样的转录组和表观基因组改变。