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利用无人机获取的生长动态对育种田双列杂交甜菜进行高通量产量预测

High-Throughput Yield Prediction of Diallele Crossed Sugar Beet in a Breeding Field Using UAV-Derived Growth Dynamics.

作者信息

Taguchi Kazunori, Guo Wei, Burridge James, Ito Atsushi, Njehia Njane Stephen, Matsuhira Hiroaki, Usui Yasuhiro, Hirafuji Masayuki

机构信息

National Agriculture and Food Research Organization, Hokkaido Agricultural Research Center, Memuro Research Station, 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.

National Agriculture and Food Research Organization, Central Region Agricultural Research Center, 3-1-3 Kannondai, Tsukuba, Ibaraki 305-8604, Japan.

出版信息

Plant Phenomics. 2024 Jul 29;6:0209. doi: 10.34133/plantphenomics.0209. eCollection 2024.

Abstract

Data-driven techniques could be used to enhance decision-making capacity of breeders and farmers. We used an RGB camera on an unmanned aerial vehicle (UAV) to collect time series data on sugar beet canopy coverage (CC) and canopy height (CH) from small-plot breeding fields including 20 genotypes per season over 3 seasons. Digital orthomosaic and digital surface models were created from each flight and were converted to individual plot-level data. Plot-level data including CC and CH were calculated on a per-plot basis. A multiple regression model was fitted, which predicts root weight (RW) ( = 0.89, 0.89, and 0.92 in the 3 seasons, respectively) and sugar content (SC) ( = 0.79, 0.83, and 0.77 in the 3 seasons, respectively) using individual time point CC and CH data. Individual CC and CH values in late June tended to be strong predictors of RW and SC, suggesting that early season growth is critical for obtaining high RW and SC. Coefficient of parentage was not a strong factor influencing SC. Integrals of CC and CH time series data were calculated for genetic analysis purposes since they are more stable over multiple growing seasons. Calculations of general combining ability and specific combining ability in F1 offspring demonstrate how growth curve quantification can be used in diallel cross analysis and yield prediction. Our simple yet robust solution demonstrates how state-of-the-art remote sensing tools and basic analysis methods can be applied to small-plot breeder fields for selection purpose.

摘要

数据驱动技术可用于提高育种者和农民的决策能力。我们使用无人机上的RGB相机,从包括每个季节20个基因型、共3个季节的小地块育种田收集甜菜冠层覆盖率(CC)和冠层高度(CH)的时间序列数据。每次飞行都会创建数字正射镶嵌图和数字表面模型,并将其转换为单个地块级数据。基于每个地块计算包括CC和CH在内的地块级数据。拟合了一个多元回归模型,该模型使用各个时间点的CC和CH数据预测根重(RW)(三个季节分别为0.89、0.89和0.92)和含糖量(SC)(三个季节分别为0.79、0.83和0.77)。6月下旬的个体CC和CH值往往是RW和SC的强预测指标,这表明生长季早期的生长对于获得高RW和SC至关重要。亲缘系数不是影响SC的重要因素。出于遗传分析目的计算了CC和CH时间序列数据的积分,因为它们在多个生长季节中更稳定。对F1后代的一般配合力和特殊配合力的计算表明了生长曲线量化如何用于双列杂交分析和产量预测。我们简单而可靠的解决方案展示了如何将先进的遥感工具和基本分析方法应用于小地块育种田以进行选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2306/11283879/bdd0587e7cbb/plantphenomics.0209.fig.001.jpg

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