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基于二肽的超分子组装的变构控制催化性质。

Allosteric Control of the Catalytic Properties of Dipeptide-Based Supramolecular Assemblies.

机构信息

Department of Chemical Sciences and Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur 741246, India.

出版信息

J Am Chem Soc. 2024 Aug 14;146(32):22522-22529. doi: 10.1021/jacs.4c06447. Epub 2024 Aug 1.

Abstract

Allostery, as seen in extant biology, governs the activity regulation of enzymes through the redistribution of conformational equilibria upon binding an effector. Herein, a minimal design is demonstrated where a dipeptide can exploit dynamic imine linkage to condense with simple aldehydes to access spherical aggregates as catalytically active states, which facilitates an orthogonal reaction due to the closer proximity of catalytic residues (imidazoles). The allosteric site (amine) of the minimal catalyst can concomitantly bind to an inhibitor via a dynamic exchange, which leads to the alternation of the energy landscape of the self-assembled state, resulting in downregulation of catalytic activity. Further, temporal control over allosteric regulation is realized via a feedback-controlled autonomous reaction network that utilizes the hydrolytic activity of the (in)active state as a function of time.

摘要

变构作用,如现存生物学中所见,通过结合效应物后构象平衡的重新分配来调节酶的活性。在此,展示了一种最小设计,其中二肽可以利用动态亚胺键与简单醛缩合,以球形聚集体作为催化活性状态,由于催化残基(咪唑)的更接近,这有利于正交反应。最小催化剂的变构部位(胺)可以通过动态交换同时与抑制剂结合,这导致自组装状态的能量景观发生改变,从而导致催化活性的下调。此外,通过利用(无)活性状态的水解活性作为时间的函数的反馈控制自主反应网络,实现了对变构调节的时间控制。

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