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(+)-儿茶素作为主要抗氧化剂和病毒蛋白酶抑制剂的双重作用。

On the dual role of (+)-catechin as primary antioxidant and inhibitor of viral proteases.

机构信息

Dipartimento di Chimica e Tecnologie Chimiche, Università Della Calabria, Rende, (CS), Italy.

Departamento de Química, Universidad Autónoma Metropolitana-Iztapalapa, Ciudad de México, 09310, Mexico.

出版信息

Comput Biol Med. 2024 Sep;180:108953. doi: 10.1016/j.compbiomed.2024.108953. Epub 2024 Jul 31.

Abstract

Natural antioxidants have become the subject of many investigations due to the role that they play in the reduction of oxidative stress. Their main scavenging mechanisms concern the direct inactivation of free radicals and the coordination of metal ions involved in Fenton-like reactions. Recently, increasing attention has been paid to non-covalent inhibition of enzymes involved in different diseases by the antioxidants. Here, a computational investigation on the primary antioxidant power of (+)-catechin against the OOH radical has been performed in both lipid-like and aqueous environments, taking into account the relevant species present in the simulated acid-base equilibria at the physiological pH. Hydrogen Atom Transfer (HAT), Single Electron Transfer (SET), and Radical Adduct Formation (RAF) mechanisms were studied, and relative rate constants were estimated. The potential inhibitory activity of the (+)-catechin towards the most important proteases from SARS-CoV-2, 3C-like (M) and papain-like (PL) proteases was also investigated by MD simulations to provide deeper atomistic insights on the binding sites. Based on the antioxidant and antiviral properties also unravelled by comparison with other molecules having similar chemical scaffold, our results propose that (+)-CTc satisfies can explicate a dual action as antioxidant and antiviral in particular versus M from SARS-CoV-2.

摘要

由于天然抗氧化剂在降低氧化应激方面的作用,它们已成为许多研究的主题。其主要的清除机制涉及直接失活自由基和配位参与芬顿样反应的金属离子。最近,人们越来越关注抗氧化剂通过非共价抑制参与不同疾病的酶。在这里,在脂质样和水相环境中,对(+)-儿茶素对 OOH 自由基的主要抗氧化能力进行了计算研究,同时考虑了在生理 pH 下模拟酸碱平衡中存在的相关物质。研究了氢原子转移(HAT)、单电子转移(SET)和自由基加成(RAF)机制,并估计了相对速率常数。还通过 MD 模拟研究了(+)-儿茶素对来自 SARS-CoV-2 的最重要的蛋白酶,3C 样(M)和木瓜蛋白酶样(PL)蛋白酶的潜在抑制活性,以提供结合部位更深层次的原子见解。基于与具有相似化学结构的其他分子进行比较所揭示的抗氧化和抗病毒特性,我们的结果表明(+)-CTc 满足作为抗氧化剂和抗病毒剂的双重作用,特别是针对 SARS-CoV-2 的 M。

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