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从堪察加温泉中分离出的一株栖热菌属新种具有水解能力。

A Novel Species of the Genus Thermanaerothrix Isolated from a Kamchatka Hot Spring Possesses Hydrolytic Capabilities.

机构信息

Winogradsky Institute of Microbiology, Research Center of Biotechnology RAS, 60-Let Oktyabrya Prospect, 7, Bld. 2, 119071, Moscow, Russia.

Faculty of Chemistry, Lomonosov Moscow State University, 1-12 Leninskie Gory, 119991, Moscow, Russia.

出版信息

Curr Microbiol. 2024 Aug 1;81(9):293. doi: 10.1007/s00284-024-03815-5.

Abstract

Hot springs are inhabited by specific microbial communities which are reservoirs of novel taxa. In this work strain 4228-RoL was isolated from the Solnechny hot spring, Uzon Caldera, Kamchatka. Cells of the strain 4228-RoL were Gram-negative rods forming multicellular filaments. The strain grew optimally at 60 °C and pH 7.0 and fermented various organic compounds including polysaccharides (microcrystalline cellulose, xylan, chitin, starch, dextrin, dextran, beta-glucan, galactomannan, glucomannan, mannan). Major fatty acids were iso-C, C, C, C, iso-C, anteiso-C and C. Genome of the strain was of 3.25 Mbp with GC content of 54.2%. Based on the whole genome comparisons and phylogenomic analysis the new isolate was affiliated to a novel species of Thermanaerothrix genus within Anaerolineae class of phylum Chloroflexota, for which the name T. solaris sp. nov. was proposed with 4228-RoL (= VKM B-3776 = UQM 41594 = BIM B-2058) as the type strain. 114 CAZymes including 43 glycoside hydrolases were found to be encoded in the genome of strain 4228-RoL. Cell-bound and extracellular enzymes of strain 4228-RoL were active against starch, dextran, mannan, xylan and various kinds of celluloses, with the highest activity against beta-glucan. Altogether, growth experiments, enzymatic activities determination and genomic analysis suggested that T. solaris strain 4228-RoL could serve as a source of glycosidases suitable for plant biomass hydrolysis.

摘要

温泉中栖息着特定的微生物群落,它们是新型分类单元的储库。在这项工作中,菌株 4228-RoL 是从堪察加乌宗火山口的索利奇尼温泉中分离出来的。该菌株的细胞为革兰氏阴性杆菌,形成多细胞丝。该菌株在 60°C 和 pH 值 7.0 下生长最佳,并能发酵各种有机化合物,包括多糖(微晶纤维素、木聚糖、几丁质、淀粉、糊精、葡聚糖、β-葡聚糖、半乳甘露聚糖、葡甘露聚糖、甘露聚糖)。主要脂肪酸为 iso-C、C、C、C、iso-C、anteiso-C 和 C。该菌株的基因组为 3.25 Mbp,GC 含量为 54.2%。基于全基因组比较和系统发育分析,新分离株属于热厌氧菌 Anaerolineae 类 Chloroflexota 门中的 Thermanaerothrix 属的一个新种,将其命名为 T. solaris sp. nov.,4228-RoL(= VKM B-3776 = UQM 41594 = BIM B-2058)为其模式株。在 4228-RoL 菌株的基因组中发现了 114 种 CAZymes,包括 43 种糖苷水解酶。菌株 4228-RoL 的细胞结合酶和胞外酶对淀粉、葡聚糖、甘露聚糖、木聚糖和各种纤维素具有活性,对β-葡聚糖的活性最高。总的来说,生长实验、酶活性测定和基因组分析表明,T. solaris 菌株 4228-RoL 可以作为适合植物生物质水解的糖苷酶的来源。

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