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基于结核分枝杆菌Ag85A、Ag85B、ESAT-6和CFP-10的新型预防性和治疗性多表位疫苗的免疫信息学方法研究

Novel prophylactic and therapeutic multi-epitope vaccine based on Ag85A, Ag85B, ESAT-6, and CFP-10 of Mycobacterium tuberculosis using an immunoinformatics approach.

作者信息

Nugraha Muhammad Fikri, Changestu Daniel Alexander, Ramadhan Rizky, Salsabila Tasya, Nurizati Arsila, Pratiwi Sari Eka, Ysrafil Ysrafil

机构信息

Medical Program, Faculty of Medicine, Universitas Tanjungpura, Pontianak, Indonesia.

Department of Biology and Pathobiology, Faculty of Medicine, Universitas Tanjungpura, Pontianak, Indonesia.

出版信息

Osong Public Health Res Perspect. 2024 Aug;15(4):286-306. doi: 10.24171/j.phrp.2024.0026. Epub 2024 Jul 26.

Abstract

BACKGROUND

Current tuberculosis (TB) control strategies face limitations, such as low antibiotic treatment compliance and a rise in multidrug resistance. Furthermore, the lack of a safe and effective vaccine compounds these challenges. The limited efficacy of existing vaccines against TB underscores the urgency for innovative strategies, such as immunoinformatics. Consequently, this study aimed to design a targeted multi-epitope vaccine against TB infection utilizing an immunoinformatics approach.

METHODS

The multi-epitope vaccine targeted Ag85A, Ag85B, ESAT-6, and CFP-10 proteins. The design adopted various immunoinformatics tools for cytotoxic T lymphocyte (CTL), helper T lymphocyte (HTL), and linear B lymphocyte (LBL) epitope prediction, the assessment of vaccine characteristics, structure modeling, population coverage analysis, disulfide engineering, solubility prediction, molecular docking/dynamics with toll-like receptors (TLRs), codon optimization/cloning, and immune simulation.

RESULTS

The multi-epitope vaccine, which was assembled using 12 CTL, 25 HTL, and 21 LBL epitopes associated with CpG adjuvants, showed promising characteristics. The immunoinformatics analysis confirmed the antigenicity, immunogenicity, and lack of allergenicity. Physicochemical evaluations indicated that the proteins were stable, thermostable, hydrophilic, and highly soluble. Docking simulations suggested high-affinity binding to TLRs, including TLR2, TLR4, and TLR9. In silico immune simulation predicted strong T cell (cytokine release) and B cell (immunoglobulin release) responses.

CONCLUSION

This immunoinformatics-designed multi-epitope vaccine targeting Ag85A, Ag85B, ESAT-6, and CFP-10 proteins showed promising characteristics in terms of stability, immunogenicity, antigenicity, solubility, and predicted induction of humoral and adaptive immune responses. This suggests its potential as a prophylactic and therapeutic vaccine against TB.

摘要

背景

当前的结核病控制策略面临诸多限制,如抗生素治疗依从性低以及多重耐药性上升。此外,缺乏安全有效的疫苗使这些挑战更加复杂。现有疫苗对结核病的疗效有限凸显了创新策略(如免疫信息学)的紧迫性。因此,本研究旨在利用免疫信息学方法设计一种针对结核感染的靶向多表位疫苗。

方法

多表位疫苗靶向Ag85A、Ag85B、ESAT-6和CFP-10蛋白。该设计采用了多种免疫信息学工具进行细胞毒性T淋巴细胞(CTL)、辅助性T淋巴细胞(HTL)和线性B淋巴细胞(LBL)表位预测、疫苗特性评估、结构建模、人群覆盖分析、二硫键工程、溶解度预测、与Toll样受体(TLR)的分子对接/动力学、密码子优化/克隆以及免疫模拟。

结果

使用与CpG佐剂相关的12个CTL、25个HTL和21个LBL表位组装而成的多表位疫苗显示出良好的特性。免疫信息学分析证实了其抗原性、免疫原性且无致敏性。物理化学评估表明这些蛋白稳定、耐热、亲水且高度可溶。对接模拟表明与TLR2、TLR4和TLR9等TLR具有高亲和力结合。计算机免疫模拟预测了强烈的T细胞(细胞因子释放)和B细胞(免疫球蛋白释放)反应。

结论

这种针对Ag85A、Ag85B、ESAT-6和CFP-10蛋白的免疫信息学设计的多表位疫苗在稳定性、免疫原性、抗原性、溶解度以及预测的体液和适应性免疫反应诱导方面显示出良好的特性。这表明其作为抗结核病预防性和治疗性疫苗的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd9d/11391370/fc12a432ad8a/j-phrp-2024-0026f1.jpg

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