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KMT2C表达在肿瘤进展和免疫治疗中作用的泛癌分析

Pan‑cancer analysis on the role of KMT2C expression in tumor progression and immunotherapy.

作者信息

Cao Wei, Xie Yawen, Cai Li, Wang Mengqing, Chen Zhuoying, Wang Ziteng, Xv Jiajia, Wang Yuqing, Li Rong, Liu Xuesong, Wang Wenliang

机构信息

Department of Thoracic Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui 230601, P.R. China.

Inflammation and Immune Mediated Diseases Laboratory of Anhui Province, School of Pharmacy, Anhui Medical University, Hefei, Anhui 230032, P.R. China.

出版信息

Oncol Lett. 2024 Jul 19;28(3):444. doi: 10.3892/ol.2024.14577. eCollection 2024 Sep.

Abstract

Histone lysine N-methyltransferase 2C (KMT2C) is involved in transcriptional regulation and DNA damage repair. Mutations in KMT2C have been implicated in the progression, metastasis, and drug resistance of multiple cancer types. However, the roles of KMT2C in the regulation of tumor prognosis, immune cell infiltration and the immune microenvironment in these multiple cancer types remain unclear. Therefore, in the present study, data from The Cancer Genome Atlas and Genotype-Tissue Expression databases were used for KMT2C expression analyses. Kaplan-Meier and univariate Cox regression analyses were also performed to investigate the prognostic role of KMT2C. In addition, Gene Set Enrichment Analysis (GSEA) was conducted to study the KMT2C-related signaling pathways. Tumor immune estimation resource 2 and single-sample GSEA were conducted to investigate the correlation between KMT2C expression and immune cell infiltrations, and Spearman's analysis was conducted to study the correlations among KMT2C, tumor mutational burden, microsatellite instability, immune regulators, chemokines and immune receptors. Immunohistochemistry of patient kidney tumor samples was performed to verify the correlation between KMT2C and programmed death-ligand 1 (PD-L1) expression. Finally, RNA interference, wound healing and colony formation assays were conducted to evaluate the effects of KMT2C expression on cell proliferation and metastasis. The results of the present study demonstrated that KMT2C was highly expressed in multiple cancer types, was a protective factor in kidney renal clear cell carcinoma and ovarian serous cystadenocarcinoma, and a risk factor for lung squamous cell carcinoma and uveal melanoma. In addition, KMT2C levels were negatively correlated with immune-activated pathways and the infiltration of immune cells, and positively correlated with inhibitory immune factors and tumor angiogenesis. Patients with low KMT2C expression had higher objective response rates to immunotherapy, and drug sensitivity analysis indicated that topoisomerase, histone deacetylase, DOT1-like histone H3K79 methyltransferase and G9A nuclear histone lysine methyltransferase inhibitors could potentially be used to treat tumors with high KMT2C expression levels. Finally, the KMT2C and PD-L1 expression levels were shown to be positively correlated, and KMT2C knockdown markedly promoted the proliferation and invasion capacities of A549 cells. In conclusion, the present study revealed that low KMT2C expression may be a promising biomarker for predicting the response of patients with cancer to immunotherapy. Conversely, high KMT2C expression was shown to promote tumor angiogenesis, which may contribute to the formation of the immunosuppressive tumor microenvironment.

摘要

组蛋白赖氨酸N -甲基转移酶2C(KMT2C)参与转录调控和DNA损伤修复。KMT2C的突变与多种癌症类型的进展、转移和耐药性有关。然而,KMT2C在这些多种癌症类型中对肿瘤预后、免疫细胞浸润和免疫微环境的调控作用仍不清楚。因此,在本研究中,使用了来自癌症基因组图谱和基因型 - 组织表达数据库的数据进行KMT2C表达分析。还进行了Kaplan - Meier和单因素Cox回归分析以研究KMT2C的预后作用。此外,进行了基因集富集分析(GSEA)以研究与KMT2C相关的信号通路。进行了肿瘤免疫估计资源2和单样本GSEA以研究KMT2C表达与免疫细胞浸润之间的相关性,并进行Spearman分析以研究KMT2C、肿瘤突变负荷、微卫星不稳定性、免疫调节因子、趋化因子和免疫受体之间的相关性。对患者肾肿瘤样本进行免疫组织化学检测以验证KMT2C与程序性死亡配体1(PD - L1)表达之间的相关性。最后,进行RNA干扰、伤口愈合和集落形成试验以评估KMT2C表达对细胞增殖和转移的影响。本研究结果表明,KMT2C在多种癌症类型中高表达,是肾透明细胞癌和卵巢浆液性囊腺癌的保护因素,是肺鳞状细胞癌和葡萄膜黑色素瘤的危险因素。此外,KMT2C水平与免疫激活途径和免疫细胞浸润呈负相关,与抑制性免疫因子和肿瘤血管生成呈正相关。KMT2C低表达的患者对免疫治疗的客观缓解率更高,药物敏感性分析表明,拓扑异构酶、组蛋白脱乙酰酶、DOT1样组蛋白H3K79甲基转移酶和G9A核组蛋白赖氨酸甲基转移酶抑制剂可能可用于治疗KMT2C表达水平高的肿瘤。最后,KMT2C和PD - L1表达水平呈正相关,KMT2C敲低显著促进A549细胞的增殖和侵袭能力。总之,本研究表明,KMT2C低表达可能是预测癌症患者对免疫治疗反应的有前景的生物标志物。相反,高KMT2C表达被证明可促进肿瘤血管生成,这可能有助于免疫抑制性肿瘤微环境的形成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85f8/11292467/dd84999eb40a/ol-28-03-14577-g00.jpg

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