Lynch Eric M, Lu Yao, Park Jin Ho, Shao Lin, Kollman Justin, Rego E Hesper
Department of Biochemistry, University of Washington, Seattle, WA 98195.
Department of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06519.
bioRxiv. 2024 Jul 25:2024.07.25.605180. doi: 10.1101/2024.07.25.605180.
The final and rate-limiting enzyme in pyrimidine biosynthesis, CTP synthase (CTPS) , is essential for the viability of and other mycobacteria. Its product, CTP, is critical for RNA, DNA, lipid and cell wall synthesis, and is involved in chromosome segregation. In various organisms across the tree of life, CTPS assembles into higher-order filaments, leading us to hypothesize that CTPS (mtCTPS) also forms higher-order structures. Here, we show that mtCTPS does assemble into filaments but with an unusual architecture not seen in other organisms. Through a combination of structural, biochemical, and cellular techniques, we show that polymerization stabilizes the active conformation of the enzyme and resists product inhibition, potentially allowing for the highly localized production of CTP within the cell. Indeed, CTPS filaments localize near the CTP-dependent complex needed for chromosome segregation, and cells expressing mutant enzymes unable to polymerize are altered in their ability to robustly form this complex. Intriguingly, mutants that alter filament formation are under positive selection in clinical isolates of , pointing to a critical role needed to withstand pressures imposed by the host and/or antibiotics. Taken together, our data reveal an unexpected mechanism for the spatially organized production of a critical nucleotide in , which may represent a vulnerability of the pathogen that can be exploited with chemotherapy.
嘧啶生物合成的最后一种且限速的酶——CTP合酶(CTPS),对结核分枝杆菌及其他分枝杆菌的生存至关重要。其产物CTP对RNA、DNA、脂质和细胞壁合成至关重要,并参与染色体分离。在生命之树的各种生物体中,CTPS组装成高阶丝状结构,这使我们推测结核分枝杆菌CTPS(mtCTPS)也会形成高阶结构。在此,我们表明mtCTPS确实组装成丝状结构,但具有其他生物体中未见的独特结构。通过结合结构、生化和细胞技术,我们表明聚合作用稳定了酶的活性构象并抵抗产物抑制,这可能使细胞内CTP能够高度局部化产生。实际上,CTPS丝状结构定位于染色体分离所需的CTP依赖性复合物附近,并且表达无法聚合的突变酶的细胞形成该复合物的能力发生改变。有趣的是,改变丝状结构形成的突变体在结核分枝杆菌临床分离株中受到正选择,这表明在抵抗宿主和/或抗生素施加的压力方面需要发挥关键作用。综上所述,我们的数据揭示了结核分枝杆菌中关键核苷酸进行空间组织生产的一种意外机制,这可能代表了该病原体的一个可被化疗利用的脆弱点。