Beijing Key Laboratory of Big Data Technology for Food Safety, Beijing Technology and Business University, Beijing, China.
Beijing Key Laboratory of Big Data Technology for Food Safety, Beijing Technology and Business University, Beijing, China.
Spectrochim Acta A Mol Biomol Spectrosc. 2024 Dec 15;323:124897. doi: 10.1016/j.saa.2024.124897. Epub 2024 Jul 28.
Assessing crop seed phenotypic traits is essential for breeding innovations and germplasm enhancement. However, the tough outer layers of thin-shelled seeds present significant challenges for traditional methods aimed at the rapid assessment of their internal structures and quality attributes. This study explores the potential of combining terahertz (THz) time-domain spectroscopy and imaging with semantic segmentation models for the rapid and non-destructive examination of these traits. A total of 120 watermelon seed samples from three distinct varieties, were curated in this study, facilitating a comprehensive analysis of both their outer layers and inner kernels. Utilizing a transmission imaging modality, THz spectral images were acquired and subsequently reconstructed employing a correlation coefficient method. Deep learning-based SegNet and DeepLab V3+ models were employed for automatic tissue segmentation. Our research revealed that DeepLab V3+ significantly surpassed SegNet in both speed and accuracy. Specifically, DeepLab V3+ achieved a pixel accuracy of 96.69 % and an intersection over the union of 91.3 % for the outer layer, with the inner kernel results closely following. These results underscore the proficiency of DeepLab V3+ in distinguishing between the seed coat and kernel, thereby furnishing precise phenotypic trait analyses for seeds with thin shells. Moreover, this study accentuates the instrumental role of deep learning technologies in advancing agricultural research and practices.
评估作物种子表型特征对于培育创新和种质增强至关重要。然而,对于旨在快速评估其内部结构和质量特性的传统方法来说,薄壳种子坚硬的外壳层带来了巨大的挑战。本研究探讨了将太赫兹(THz)时域光谱和成像与语义分割模型相结合,用于快速、无损地检查这些特征的潜力。本研究共收集了来自三个不同品种的 120 个西瓜种子样本,对它们的外壳和内部内核进行了全面分析。采用透射成像模式,获取了太赫兹光谱图像,并使用相关系数法进行了重建。基于深度学习的 SegNet 和 DeepLab V3+模型被用于自动组织分割。我们的研究表明,DeepLab V3+在速度和准确性方面均显著优于 SegNet。具体来说,DeepLab V3+在外壳层的像素准确率达到了 96.69%,交并比达到了 91.3%,内核层的结果紧随其后。这些结果表明 DeepLab V3+在区分种皮和内核方面的能力很强,从而为薄壳种子提供了精确的表型特征分析。此外,本研究强调了深度学习技术在推动农业研究和实践方面的重要作用。