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高分辨率疾病表型分析揭示了番茄作物野生近缘种对……的不同抗性机制。

High-Resolution Disease Phenotyping Reveals Distinct Resistance Mechanisms of Tomato Crop Wild Relatives against .

作者信息

Einspanier Severin, Tominello-Ramirez Christopher, Hasler Mario, Barbacci Adelin, Raffaele Sylvain, Stam Remco

机构信息

Department of Phytopathology and Crop Protection, Institute of Phytopathology, Faculty of Agricultural and Nutritional Sciences, Christian-Albrechts-University, 24118 Kiel, Germany.

Lehrfach Variationsstatistik, Faculty of Agricultural and Nutritional Sciences, Christian-Albrechts-University, Kiel, 24118 Kiel, Germany.

出版信息

Plant Phenomics. 2024 Aug 5;6:0214. doi: 10.34133/plantphenomics.0214. eCollection 2024.

DOI:10.34133/plantphenomics.0214
PMID:39105186
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11298253/
Abstract

Besides the well-understood qualitative disease resistance, plants possess a more complex quantitative form of resistance: quantitative disease resistance (QDR). QDR is commonly defined as a partial but more durable form of resistance and, therefore, might display a valuable target for resistance breeding. The characterization of QDR phenotypes, especially of wild crop relatives, displays a bottleneck in deciphering QDR's genomic and regulatory background. Moreover, the relationship between QDR parameters, such as infection frequency, lag-phase duration, and lesion growth rate, remains elusive. High hurdles for applying modern phenotyping technology, such as the low availability of phenotyping facilities or complex data analysis, further dampen progress in understanding QDR. Here, we applied a low-cost (<1.000 €) phenotyping system to measure lesion growth dynamics of wild tomato species (e.g., or ). We provide insight into QDR diversity of wild populations and derive specific QDR mechanisms and their cross-talk We show how temporally continuous observations are required to dissect end-point severity into functional resistance mechanisms. The results of our study show how QDR can be maintained by facilitating different defense mechanisms during host-parasite interaction and that the capacity of the QDR toolbox highly depends on the host's genetic context. We anticipate that the present findings display a valuable resource for more targeted functional characterization of the processes involved in QDR. Moreover, we show how modest phenotyping technology can be leveraged to help answer highly relevant biological questions.

摘要

除了人们熟知的定性抗病性外,植物还具有一种更复杂的定量抗病形式:定量抗病性(QDR)。QDR通常被定义为一种部分但更持久的抗病形式,因此可能是抗病育种的一个有价值的目标。QDR表型的表征,尤其是野生作物近缘种的表型,是解读QDR基因组和调控背景的一个瓶颈。此外,QDR参数之间的关系,如感染频率、滞后期持续时间和病斑生长速率,仍然难以捉摸。应用现代表型分析技术存在诸多障碍,如表型分析设施可用性低或数据分析复杂,这进一步阻碍了对QDR的理解。在此,我们应用了一种低成本(<1000欧元)的表型分析系统来测量野生番茄物种(如或)的病斑生长动态。我们深入了解了野生种群的QDR多样性,并推导了特定的QDR机制及其相互作用。我们展示了如何需要进行时间上连续的观察,以便将终点严重程度分解为功能抗病机制。我们的研究结果表明,QDR如何通过在宿主-寄生虫相互作用过程中促进不同的防御机制来维持,以及QDR工具箱的能力高度依赖于宿主的遗传背景。我们预计,目前的研究结果为更有针对性地对QDR相关过程进行功能表征提供了宝贵资源。此外,我们展示了如何利用适度的表型分析技术来帮助回答高度相关的生物学问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/aff38a6b128e/plantphenomics.0214.fig.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/56722dd4a120/plantphenomics.0214.fig.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/a6fdce8b3aa5/plantphenomics.0214.fig.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/72238b32ef07/plantphenomics.0214.fig.003.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/6268249dc489/plantphenomics.0214.fig.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/10439aad4de7/plantphenomics.0214.fig.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/f1c7e22f2ae9/plantphenomics.0214.fig.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/aff38a6b128e/plantphenomics.0214.fig.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/56722dd4a120/plantphenomics.0214.fig.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/a6fdce8b3aa5/plantphenomics.0214.fig.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/72238b32ef07/plantphenomics.0214.fig.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/2041f2247d58/plantphenomics.0214.fig.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/6268249dc489/plantphenomics.0214.fig.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/10439aad4de7/plantphenomics.0214.fig.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/f1c7e22f2ae9/plantphenomics.0214.fig.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e74/11298253/aff38a6b128e/plantphenomics.0214.fig.008.jpg

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A MAP kinase cascade broadly regulates the lifestyle of Sclerotinia sclerotiorum and can be targeted by HIGS for disease control.一个 MAP 激酶级联反应广泛调节核盘菌的生活方式,可以通过 HIGS 进行靶向治疗来控制疾病。
Plant J. 2024 Apr;118(2):324-344. doi: 10.1111/tpj.16606. Epub 2023 Dec 27.
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Pitfalls and potential of high-throughput plant phenotyping platforms.高通量植物表型分析平台的陷阱与潜力
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