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1-脱氧-d-木酮糖 5-磷酸还原异构酶作为抗弓形虫药物的靶点:抑制剂的晶体结构、生化特性和生物学评价。

1-Deoxy-d-xylulose 5-phosphate reductoisomerase as target for anti Toxoplasma gondii agents: crystal structure, biochemical characterization and biological evaluation of inhibitors.

机构信息

Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University, Düsseldorf, Germany.

University Hospital Düsseldorf, Düsseldorf, Germany.

出版信息

Biochem J. 2024 Aug 21;481(16):1075-1096. doi: 10.1042/BCJ20240110.

Abstract

Toxoplasma gondii is a widely distributed apicomplexan parasite causing toxoplasmosis, a critical health issue for immunocompromised individuals and for congenitally infected foetuses. Current treatment options are limited in number and associated with severe side effects. Thus, novel anti-toxoplasma agents need to be identified and developed. 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) is considered the rate-limiting enzyme in the non-mevalonate pathway for the biosynthesis of the isoprenoid precursors isopentenyl pyrophosphate and dimethylallyl pyrophosphate in the parasite, and has been previously investigated for its key role as a novel drug target in some species, encompassing Plasmodia, Mycobacteria and Escherichia coli. In this study, we present the first crystal structure of T. gondii DXR (TgDXR) in a tertiary complex with the inhibitor fosmidomycin and the cofactor NADPH in dimeric conformation at 2.5 Å resolution revealing the inhibitor binding mode. In addition, we biologically characterize reverse α-phenyl-β-thia and β-oxa fosmidomycin analogues and show that some derivatives are strong inhibitors of TgDXR which also, in contrast with fosmidomycin, inhibit the growth of T. gondii in vitro. Here, ((3,4-dichlorophenyl)((2-(hydroxy(methyl)amino)-2-oxoethyl)thio)methyl)phosphonic acid was identified as the most potent anti T. gondii compound. These findings will enable the future design and development of more potent anti-toxoplasma DXR inhibitors.

摘要

刚地弓形虫是一种广泛分布的顶复门寄生虫,可引起弓形体病,这对免疫功能低下的个体和先天性感染胎儿是一个严重的健康问题。目前的治疗选择数量有限,且伴有严重的副作用。因此,需要确定和开发新的抗弓形虫药物。1-脱氧-d-木酮糖 5-磷酸还原异构酶(DXR)被认为是寄生虫中异戊烯焦磷酸和二甲基烯丙基焦磷酸的非甲羟戊酸途径生物合成的限速酶,先前已对其在某些物种(包括疟原虫、分枝杆菌和大肠杆菌)中的关键作用作为一种新的药物靶点进行了研究。在这项研究中,我们首次报道了刚地弓形虫 DXR(TgDXR)与抑制剂福米肟和辅因子 NADPH 形成三元复合物的晶体结构,该复合物以二聚体形式存在,分辨率为 2.5 Å,揭示了抑制剂的结合模式。此外,我们对反式α-苯基-β-硫代和β-氧代福米肟类似物进行了生物学表征,并表明一些衍生物是 TgDXR 的强抑制剂,与福米肟不同的是,它们还能抑制弓形虫在体外的生长。在这里,((3,4-二氯苯基)((2-(羟基(甲基)氨基)-2-氧代乙基)硫基)甲基)膦酸被鉴定为最有效的抗弓形虫化合物。这些发现将为未来设计和开发更有效的抗弓形虫 DXR 抑制剂提供依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0366/11346426/773be624c28d/BCJ-481-1075-g0001.jpg

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