Panmanee Jiraporn, Charoensutthivarakul Sitthivut, Cheng Chew Weng, Promthep Kornkanok, Mukda Sujira, Prasertporn Tanya, Nopparat Chutikorn, Teerapo Kittitat, Supcharoen Promsup, Petchyam Nopphon, Chetsawang Banthit, Govitrapong Piyarat, Phanchana Matthew
Research Center for Neuroscience, Institute of Molecular Biosciences, Mahidol University, Nakhon Pathom, 73170, Thailand.
Innovative Molecular Discovery Laboratory (iMOD), School of Bioinnovation and Bio-Based Product Intelligence, Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
Mol Neurobiol. 2025 Feb;62(2):2333-2347. doi: 10.1007/s12035-024-04395-y. Epub 2024 Aug 6.
A nuclear retinoic acid receptor (RAR)-related orphan receptor β (RORβ) is strictly expressed in the brain, particularly in the pineal gland where melatonin is primarily synthesized and concentrated. The controversial issues regarding the direct interaction of melatonin toward ROR receptors have prompted us to investigate the potential melatonin binding sites on different ROR isoforms. We adopted computational and biophysical approaches to investigate the potential of melatonin as the ligand for RORs, in particular RORβ. Herein, possible melatonin binding sites were predicted by molecular docking on human RORs. The results showed that melatonin might be able to bind within the ligand-binding domain (LBD) of all RORs, despite their difference in sequence homology. The predicted melatonin binding scores were comparable to binding energies with respect to those of melatonin interaction to the well-characterized membrane receptors, MT1 and MT2. Although the computational analyses suggested the binding potential of melatonin to the LBD of RORβ, biophysical validation failed to confirm the binding. Melatonin was unable to alter the stability of human RORβ as shown by the unaltered melting temperatures upon melatonin administration in differential scanning fluorometry (DSF). A thermodynamic isothermal titration calorimetry (ITC) profile showed that melatonin did not interact with human RORβ in solutions, even in the presence of SRC-1 co-activator peptide. Although the direct interaction between the LBD of RORβ could not be established, RORα and RORβ gene expressions were increased upon 24 h treatment with μM-range melatonin. Our data, thus, support the studies that the nuclear effects of melatonin may not be directly mediated via its interaction with the RORβ. These findings warrant further investigation on how melatonin interacts with ROR signaling and urge the melatonin research community for a paradigm shift in the direct interaction of melatonin toward RORs. The quest to identify nuclear receptors for melatonin in neuronal cells remains valid for the community to achieve.
核视黄酸受体(RAR)相关孤儿受体β(RORβ)在大脑中严格表达,特别是在主要合成和浓缩褪黑素的松果体中。关于褪黑素与ROR受体直接相互作用的争议性问题促使我们研究不同ROR亚型上潜在的褪黑素结合位点。我们采用计算和生物物理方法来研究褪黑素作为RORs(特别是RORβ)配体的潜力。在此,通过对人RORs进行分子对接预测了可能的褪黑素结合位点。结果表明,尽管RORs在序列同源性上存在差异,但褪黑素可能能够结合在所有RORs的配体结合域(LBD)内。预测的褪黑素结合分数与褪黑素与特征明确的膜受体MT1和MT2相互作用的结合能相当。尽管计算分析表明褪黑素对RORβ的LBD具有结合潜力,但生物物理验证未能证实这种结合。如差示扫描荧光法(DSF)中给予褪黑素后熔解温度未改变所示,褪黑素无法改变人RORβ的稳定性。热力学等温滴定量热法(ITC)图谱显示,即使存在SRC-1共激活肽,褪黑素在溶液中也不与人RORβ相互作用。尽管无法确定RORβ的LBD之间的直接相互作用,但在μM范围的褪黑素处理24小时后,RORα和RORβ基因表达增加。因此,我们的数据支持了关于褪黑素的核效应可能不通过其与RORβ的相互作用直接介导的研究。这些发现值得进一步研究褪黑素如何与ROR信号传导相互作用,并促使褪黑素研究界在褪黑素与RORs的直接相互作用方面进行范式转变。在神经元细胞中寻找褪黑素的核受体的探索对该领域来说仍然是一个有待实现的目标。