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分子洞察揭示了细胞膜中的糖脂如何减轻纳米材料的入侵。

Molecular insights reveal how the glycolipids in cell membrane mitigates nanomaterial's invasion.

机构信息

Department of Gastrointestinal and Hepatobiliary Surgery, Shenzhen Longhua District Central Hospital, No. 187, Guanlan Road, Longhua District, Shenzhen, 518110, Guangdong Province, China.

College of Physical Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu Province, China.

出版信息

Environ Pollut. 2024 Nov 1;360:124678. doi: 10.1016/j.envpol.2024.124678. Epub 2024 Aug 5.

Abstract

Nanomaterial-cellular membrane interaction is crucial for the cytotoxicity of such materials in theoretical investigations. However, previous research often used cellular membrane models with one or few lipid types, which deviates significantly from realistic membrane compositions. Here, employing molecular dynamics (MD) simulations, we investigate the impact of a typical nanomaterial, boron nitride (BN), on a cellular membrane model based on the realistic small intestinal epithelial cell (SIEC) membrane. This membrane contains a complex composition, including abundant glycolipids. Our MD simulations reveal that BN nanosheet can partially insert into the SIEC membrane, maintaining a stable binding conformation without causing obvious structural changes. Dynamic analyses suggest that van der Waals (vdW) interactions drive the binding process between BN and the SIEC membrane. Further simulation of the interaction between BN nanosheet and deglycosylated SIEC membrane confirms that BN nanosheet cause significant structural damage to deglycosylated SIEC membranes, completely inserting into the membrane, extracting lipids, and burying some lipid hydrophilic heads within the membrane interior. Quantitative analyses of mean squared displacements (MSD) of membranes, membrane thicknesses, area per lipid, and order parameters indicate that BN nanosheet causes more substantial damage to deglycosylated SIEC membrane than to intact SIEC membrane. This comparison suggests the molecular mechanism involved in mitigating BN invasion by SIEC membrane that the polysaccharide heads of glycolipids in the SIEC membrane form a significant steric hindrance on membrane surface, not only hindering the insertion of BN, but also resisting the lipid extraction by BN. Free energy calculations further support this conclusion. Overall, our MD simulations not only shed new light into the reduced impact of BN nanosheet on the realistic SIEC membrane but also highlight the importance of glycolipids in protecting cell membranes from nanomaterial invasion, contributing to a deeper understanding of nanomaterial-realistic cell membrane interactions.

摘要

纳米材料与细胞膜的相互作用对于这类材料在理论研究中的细胞毒性至关重要。然而,先前的研究通常使用具有一种或少数几种脂质类型的细胞膜模型,这与真实膜组成有很大的偏差。在这里,我们采用分子动力学(MD)模拟的方法,研究了典型纳米材料氮化硼(BN)对基于真实小肠上皮细胞膜(SIEC)的细胞膜模型的影响。这种细胞膜含有丰富的糖脂等复杂的成分。我们的 MD 模拟结果表明,BN 纳米片可以部分插入 SIEC 细胞膜,保持稳定的结合构象,而不会引起明显的结构变化。动态分析表明,范德华(vdW)相互作用驱动 BN 与 SIEC 细胞膜之间的结合过程。进一步模拟 BN 纳米片与去糖基化 SIEC 细胞膜的相互作用证实,BN 纳米片会对去糖基化 SIEC 细胞膜造成明显的结构损伤,完全插入细胞膜,提取脂质,并将一些脂质亲水头埋藏在膜内部。通过对细胞膜的均方根位移(MSD)、膜厚度、单位面积脂质和序参数的定量分析,表明 BN 纳米片对去糖基化 SIEC 细胞膜的损伤比完整的 SIEC 细胞膜更大。这种比较表明了 SIEC 细胞膜中糖脂的多糖头在细胞膜表面形成了显著的空间位阻,不仅阻碍了 BN 的插入,还阻止了 BN 对脂质的提取,从而减轻 BN 入侵的分子机制。自由能计算进一步支持了这一结论。总的来说,我们的 MD 模拟不仅为 BN 纳米片对真实 SIEC 细胞膜的影响较小提供了新的认识,还强调了糖脂在保护细胞膜免受纳米材料入侵方面的重要性,有助于深入了解纳米材料与真实细胞膜的相互作用。

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