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紫堇属(罂粟科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of L. (Papaveraceae).

作者信息

Mano Haruto, Boltenkov Eugeny V, Marchuk Elena A, Nakamura Koh, Yoichi Watanabe

机构信息

Graduate School of Horticulture, Chiba University, Matsudo, Chiba, Japan.

Botanical Garden-Institute, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, Russia.

出版信息

Mitochondrial DNA B Resour. 2024 Aug 6;9(8):1010-1014. doi: 10.1080/23802359.2024.2386410. eCollection 2024.

DOI:10.1080/23802359.2024.2386410
PMID:39113749
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11305052/
Abstract

L., a widespread species in northern Eurasia, is a valuable medicinal plant, but its chloroplast genome has not previously been reported. We determined its complete chloroplast genome using a high-throughput sequencing technique. Its total length was 169,241 bp, consisting of a large single-copy region of 93,301 bp and a small single-copy region of 17,316 bp, separated by a pair of inverted repeat regions of 29,312 bp. A total of 140 genes were annotated, including 91 protein coding genes, 41 tRNA genes, and eight rRNA genes. The phylogenetic analysis shows that and of the subfamily Hypecoideae are monophyletic with the highest support.

摘要

L.是一种在欧亚大陆北部广泛分布的物种,是一种有价值的药用植物,但其叶绿体基因组此前尚未见报道。我们使用高通量测序技术确定了其完整的叶绿体基因组。其全长为169,241 bp,由一个93,301 bp的大单拷贝区域和一个17,316 bp的小单拷贝区域组成,这两个区域被一对29,312 bp的反向重复区域隔开。总共注释了140个基因,包括91个蛋白质编码基因、41个tRNA基因和8个rRNA基因。系统发育分析表明,Hypericoideae亚科的 和 是单系的,支持率最高。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/0bc42b037f6f/TMDN_A_2386410_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/2630246b0946/TMDN_A_2386410_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/317403b8de80/TMDN_A_2386410_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/0bc42b037f6f/TMDN_A_2386410_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/2630246b0946/TMDN_A_2386410_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/317403b8de80/TMDN_A_2386410_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40a8/11305052/0bc42b037f6f/TMDN_A_2386410_F0003_C.jpg

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