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韩国特有属——紫堇属(罂粟科)的完整质体基因组序列

Complete plastid genome sequences of Nakai (Papaveraceae), a Korea endemic genus.

作者信息

Kim Hoe-Won, Kim Ki-Joong

机构信息

Division of Life Sciences, Korea University, Seoul, Korea.

出版信息

Mitochondrial DNA B Resour. 2016 Sep 5;1(1):601-602. doi: 10.1080/23802359.2016.1209089.

DOI:10.1080/23802359.2016.1209089
PMID:33473566
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800022/
Abstract

The plastid genome (plastome) sequences from the monotypic endemic genus of Korea, Nakai, were completed in this study (NCBI No. KT274030). The complete plastome size was 158,824 bp in length, containing a pair of 26,685 bp inverted repeat (IR), which were separated by a large and small single copy (LSC, SSC) region of 86,916 bp and 18,538 bp, respectively. The overall GC contents were 38.8%. The plastome contained 112 genes, including protein-coding genes, 30 tRNA genes, 4 rRNA genes. Sixteen genes contained one intron and two genes had two introns. Phylogenetic analysis revealed that was sister group of with 100% support value.

摘要

本研究完成了来自韩国单型特有属中井(Nakai)的质体基因组(质体基因组)序列(NCBI编号:KT274030)。完整的质体基因组长度为158,824 bp,包含一对26,685 bp的反向重复序列(IR),它们分别被86,916 bp和18,538 bp的大单拷贝(LSC)和小单拷贝(SSC)区域隔开。总体GC含量为38.8%。质体基因组包含112个基因,包括蛋白质编码基因、30个tRNA基因、4个rRNA基因。16个基因含有一个内含子,两个基因有两个内含子。系统发育分析表明,在100%的支持值下,[具体物种名称未给出]是[另一具体物种名称未给出]的姐妹群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2ac/7800022/e0f19de85cba/TMDN_A_1209089_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2ac/7800022/e0f19de85cba/TMDN_A_1209089_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2ac/7800022/e0f19de85cba/TMDN_A_1209089_F0001_B.jpg

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本文引用的文献

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