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基于过渡态理论并结合启发式校正极化连续介质模型计算溶液中的速率系数:以分子间狄尔斯-阿尔德反应为例进行研究。

Computation of rate coefficients in solutions based on transition state theory combined with a heuristically corrected polarizable continuum model: intermolecular Diels-Alder reactions as case studies.

作者信息

Izato Yu-Ichiro, Koshi Mitsuo, Miyake Atsumi

机构信息

Graduate School of Information and Environment Sciences, Yokohama National University, 79-7 Tokiwadai, Hodogaya-ku, Yokohama, Japan.

The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan.

出版信息

Phys Chem Chem Phys. 2024 Aug 22;26(33):22122-22133. doi: 10.1039/d4cp01078g.

Abstract

Transition state theory (TST) based on activation parameters computed using quantum mechanics calculations combined with the polarizable continuum model (QM/PCM) is a fundamental tool for investigating reaction rates in the liquid phase. In conventional QM/PCM methods, thermodynamic data and partition functions for a solute are often derived from a quasi-ideal gas treatment (IGT) widely implemented in commercially available computation packages. This approach tends to overestimate entropy because calculations of thermodynamic parameters in the liquid phase ignore hindered translational and rotational modes in real solutions. The present work formulated partition functions for more realistic solutes hindered by surrounding solvent molecules in conjunction with the basic QM/PCM concept. In addition, a configuration partition function for solute molecules at a standard concentration of 1 mol dm was incorporated using a simple lattice model. The canonical partition function and thermodynamic functions were derived based on statistical thermodynamics for localized systems. Expressions for rate coefficients within TST were also derived with a consistent formalism based on the standard state selected in partition function calculations. The performance of the proposed method was assessed by predicting rate coefficients for three different Diels-Alder reactions and comparing these with experimental results. QM/PCM calculations at the G4//ωB97X-D/6-311++G(d,p)/IEF-PCM level of theory with corrections for the dispersion and repulsion energies were performed to obtain the electronic structures of stationary points on potential energy surfaces as a means of finding activation enthalpy, entropy and Gibbs energy values based on revised partition functions as well as predicting rate coefficients. The activation Gibbs energies obtained from our proposed method were lower than those obtained from the IGT method due to reasonable entropy computations. The proposed method overestimated the rate coefficients by one to two orders of magnitude compared to the experimental values, whereas the IGT method underestimated them by the same amount. This discrepancy arises because the proposed method calculates the partition function from the viewpoint of a localized system, whereas the IGT method calculates it from the viewpoint of a non-localized system. Given that actual liquids exist in a state between non-localized and localized systems, it is essential to formulate the partition function in a way that more accurately represents the liquid state.

摘要

基于使用量子力学计算结合极化连续介质模型(QM/PCM)计算得到的活化参数的过渡态理论(TST),是研究液相反应速率的基本工具。在传统的QM/PCM方法中,溶质的热力学数据和配分函数通常源自商业计算软件包中广泛采用的准理想气体处理(IGT)。这种方法往往会高估熵,因为液相中热力学参数的计算忽略了实际溶液中受阻的平动和转动模式。本研究结合基本的QM/PCM概念,为受周围溶剂分子阻碍的更实际溶质制定了配分函数。此外,使用简单晶格模型纳入了标准浓度为1 mol dm的溶质分子的构型配分函数。基于局部系统的统计热力学推导了正则配分函数和热力学函数。还基于配分函数计算中选定的标准态,用一致的形式推导了TST内速率系数的表达式。通过预测三种不同狄尔斯-阿尔德反应的速率系数并将其与实验结果进行比较,评估了所提方法的性能。在G4//ωB97X-D/6-311++G(d,p)/IEF-PCM理论水平上进行QM/PCM计算,并对色散和排斥能进行校正,以获得势能面上驻点的电子结构,作为基于修正配分函数找到活化焓、熵和吉布斯能值以及预测速率系数的一种手段。由于合理的熵计算,从我们所提方法获得的活化吉布斯能低于从IGT方法获得的活化吉布斯能。与实验值相比,所提方法高估了速率系数一到两个数量级,而IGT方法低估了相同的量。这种差异的出现是因为所提方法从局部系统的角度计算配分函数,而IGT方法从非局部系统的角度计算配分函数。鉴于实际液体存在于非局部和局部系统之间的状态,以更准确表示液态的方式制定配分函数至关重要。

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