Negi Nikita, Selvamani Selva Babu, Ramasamy Gandhi Gracy, Nagarjuna Reddy K V, Pathak Jyoti, Thiruvengadam Venkatesan, Mohan Muthugounder, Dubey Vinod Kumar, Sushil Satya N
Division of Genomic Resources, ICAR - National Bureau of Agricultural Insect Resources, Bangalore - 560024, India; Department of Entomology, Indira Gandhi Krishi Vishwavidyalaya, Raipur - 492012, India. Electronic address: https://twitter.com/NegiNikita92892.
Division of Genomic Resources, ICAR - National Bureau of Agricultural Insect Resources, Bangalore - 560024, India. Electronic address: https://twitter.com/MithranSelva.
Comp Biochem Physiol Part D Genomics Proteomics. 2024 Dec;52:101305. doi: 10.1016/j.cbd.2024.101305. Epub 2024 Aug 5.
Maconellicoccus hirsutus is a highly polyphagous insect pest, posing a substantial threat to various crop sp., especially in the tropical and sub-tropical regions of the world. While extensive physiological and biological studies have been conducted on this pest, the lack of genetic information has hindered our understanding of the molecular mechanisms underlying its growth, development, and xenobiotic metabolism. The Cytochrome P450 gene, a member of the CYP gene superfamily ubiquitous in living organisms is associated with growth, development, and the metabolism of both endogenous and exogenous substances, contributing to the insect's adaptability in diverse environments. To elucidate the specific role of the CYP450 gene family in M. hirsutus which has remained largely unexplored, a de novo transcriptome assembly of the pink mealybug was constructed. A total of 120 proteins were annotated as CYP450 genes through homology search of the predicted protein sequences across different databases. Phylogenetic studies resulted in categorizing 120 CYP450 genes into four CYP clans. A total of 22 CYP450 families and 30 subfamilies were categorized, with CYP6 forming the dominant family. The study also revealed five genes (Halloween genes) associated with the insect hormone biosynthesis pathway. Further, the expression of ten selected CYP450 genes was studied using qRT-PCR across crawler, nymph, and adult stages, and identified genes that were expressed at specific stages of the insects. Thus, the findings of this study reveal the expression dynamics and possible function of the CYP450 gene family in the growth, development, and adaptive strategies of M. hirsutus which can be further functionally validated.
多毛白轮盾蚧是一种多食性害虫,对多种作物构成重大威胁,尤其是在世界热带和亚热带地区。虽然已经对这种害虫进行了广泛的生理和生物学研究,但缺乏遗传信息阻碍了我们对其生长、发育和异生物质代谢潜在分子机制的理解。细胞色素P450基因是CYP基因超家族的成员,在生物体中普遍存在,与生长、发育以及内源性和外源性物质的代谢有关,有助于昆虫在不同环境中的适应性。为了阐明CYP450基因家族在多毛白轮盾蚧中尚未得到充分探索的具体作用,构建了粉蚧的从头转录组组装。通过在不同数据库中对预测的蛋白质序列进行同源性搜索,共注释了120种蛋白质为CYP450基因。系统发育研究将120个CYP450基因分为四个CYP族。总共分类了22个CYP450家族和30个亚家族,其中CYP6形成了优势家族。该研究还揭示了五个与昆虫激素生物合成途径相关的基因(万圣节基因)。此外,使用qRT-PCR研究了在若虫、若虫和成虫阶段中十个选定的CYP450基因的表达,并鉴定了在昆虫特定阶段表达的基因。因此,本研究的结果揭示了CYP450基因家族在多毛白轮盾蚧生长、发育和适应策略中的表达动态和可能功能,这可以进一步进行功能验证。