• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

微生物群落的高阶相互作用和涌现特性:合成生态学的力量。

Higher-order interactions and emergent properties of microbial communities: The power of synthetic ecology.

作者信息

Gallardo-Navarro Oscar, Aguilar-Salinas Bernardo, Rocha Jorge, Olmedo-Álvarez Gabriela

机构信息

Centro de Investigación y de Estudios Avanzado del Instituto Politécnico Nacional, Unidad Irapuato, Mexico.

Centro de Investigaciones Biológicas del Noroeste, S. C., La Paz, Mexico.

出版信息

Heliyon. 2024 Jul 9;10(14):e33896. doi: 10.1016/j.heliyon.2024.e33896. eCollection 2024 Jul 30.

DOI:10.1016/j.heliyon.2024.e33896
PMID:39130413
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11315108/
Abstract

Humans have long relied on microbial communities to create products, produce energy, and treat waste. The microbiota residing within our bodies directly impacts our health, while the soil and rhizosphere microbiomes influence the productivity of our crops. However, the complexity and diversity of microbial communities make them challenging to study and difficult to develop into applications, as they often exhibit the emergence of unpredictable higher-order phenomena. Synthetic ecology aims at simplifying complexity by constituting synthetic or semi-natural microbial communities with reduced diversity that become easier to study and analyze. This strategy combines methodologies that simplify existing complex systems (top-down approach) or build the system from its constituent components (bottom-up approach). Simplified communities are studied to understand how interactions among populations shape the behavior of the community and to model and predict their response to external stimuli. By harnessing the potential of synthetic microbial communities through a multidisciplinary approach, we can advance knowledge of ecological concepts and address critical public health, agricultural, and environmental issues more effectively.

摘要

长期以来,人类一直依靠微生物群落来制造产品、生产能源和处理废物。存在于我们体内的微生物群直接影响我们的健康,而土壤和根际微生物群落则影响我们农作物的产量。然而,微生物群落的复杂性和多样性使得它们难以研究,也难以发展成应用,因为它们常常表现出不可预测的高阶现象。合成生态学旨在通过构建多样性降低的合成或半自然微生物群落来简化复杂性,这些群落更易于研究和分析。这种策略结合了简化现有复杂系统的方法(自上而下方法)或从其组成部分构建系统的方法(自下而上方法)。对简化群落进行研究,以了解种群间的相互作用如何塑造群落的行为,并对其对外界刺激的反应进行建模和预测。通过多学科方法利用合成微生物群落的潜力,我们可以推进对生态概念的认识,并更有效地解决关键的公共卫生、农业和环境问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/8588a750cf65/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/b6dc6dd18a64/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/755a3d1a2cf2/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/74e727d85c99/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/b37e2c8fefe0/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/45c2eb7a3637/fx2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/de97132ac851/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/ff7bf86882ae/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/8588a750cf65/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/b6dc6dd18a64/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/755a3d1a2cf2/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/74e727d85c99/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/b37e2c8fefe0/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/45c2eb7a3637/fx2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/de97132ac851/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/ff7bf86882ae/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b503/11315108/8588a750cf65/gr6.jpg

相似文献

1
Higher-order interactions and emergent properties of microbial communities: The power of synthetic ecology.微生物群落的高阶相互作用和涌现特性:合成生态学的力量。
Heliyon. 2024 Jul 9;10(14):e33896. doi: 10.1016/j.heliyon.2024.e33896. eCollection 2024 Jul 30.
2
3
THOR's Hammer: the Antibiotic Koreenceine Drives Gene Expression in a Model Microbial Community.雷神之锤:抗生素 Koreenceine 在微生物群落模型中驱动基因表达。
mBio. 2022 Jun 28;13(3):e0248621. doi: 10.1128/mbio.02486-21. Epub 2022 Apr 18.
4
Introducing THOR, a Model Microbiome for Genetic Dissection of Community Behavior.介绍 THOR,一种用于遗传剖析群落行为的模型微生物组。
mBio. 2019 Mar 5;10(2):e02846-18. doi: 10.1128/mBio.02846-18.
5
Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance.代谢组学揭示了微生物结构、相互作用以及在定义的群落中对环境干扰的响应的动态调节的见解。
BMC Microbiol. 2021 Nov 8;21(1):308. doi: 10.1186/s12866-021-02370-4.
6
Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling.农业管理和植物选择会相互作用影响根际微生物群落结构和氮循环。
Microbiome. 2019 Nov 7;7(1):146. doi: 10.1186/s40168-019-0756-9.
7
A Reproducible and Tunable Synthetic Soil Microbial Community Provides New Insights into Microbial Ecology.可重现且可调的人工合成土壤微生物群落为微生物生态学提供了新的见解。
mSystems. 2022 Dec 20;7(6):e0095122. doi: 10.1128/msystems.00951-22. Epub 2022 Dec 6.
8
Synthetic Methane-Consuming Communities from a Natural Lake Sediment.天然湖底沉积物中合成甲烷消耗群落。
mBio. 2019 Jul 23;10(4):e01072-19. doi: 10.1128/mBio.01072-19.
9
Effects of Agricultural Management on Rhizosphere Microbial Structure and Function in Processing Tomato Plants.农业管理对加工番茄根系微生物结构和功能的影响。
Appl Environ Microbiol. 2019 Aug 1;85(16). doi: 10.1128/AEM.01064-19. Print 2019 Aug 15.
10
Microbial Systems Ecology to Understand Cross-Feeding in Microbiomes.利用微生物系统生态学理解微生物群落中的交叉喂养现象。
Front Microbiol. 2021 Dec 20;12:780469. doi: 10.3389/fmicb.2021.780469. eCollection 2021.

引用本文的文献

1
Sustainable Approaches in Viticulture: From Wastes and Side Streams to High-Value Products.葡萄栽培中的可持续方法:从废弃物和副产品到高价值产品
Adv Biochem Eng Biotechnol. 2025 Apr 19. doi: 10.1007/10_2025_281.

本文引用的文献

1
Root microbiota of tea plants regulate nitrogen homeostasis and theanine synthesis to influence tea quality.茶树根际微生物群调控氮素平衡和茶氨酸合成影响茶叶品质。
Curr Biol. 2024 Feb 26;34(4):868-880.e6. doi: 10.1016/j.cub.2024.01.044. Epub 2024 Feb 15.
2
Surface colonization by promotes its survival in a model microbial community.通过……进行的表面定殖促进了其在模型微生物群落中的存活。 (注:原句中“by”后面缺少具体内容)
mBio. 2024 Mar 13;15(3):e0342823. doi: 10.1128/mbio.03428-23. Epub 2024 Feb 8.
3
A molecular toolkit of cross-feeding strains for engineering synthetic yeast communities.
用于工程化合成酵母群落的交叉喂养菌株的分子工具包。
Nat Microbiol. 2024 Mar;9(3):848-863. doi: 10.1038/s41564-023-01596-4. Epub 2024 Feb 7.
4
Oxidative stress changes interactions between 2 bacterial species from competitive to facilitative.氧化应激改变了 2 种细菌物种之间的相互作用,从竞争变为辅助。
PLoS Biol. 2024 Feb 5;22(2):e3002482. doi: 10.1371/journal.pbio.3002482. eCollection 2024 Feb.
5
Identifying microbiota community patterns important for plant protection using synthetic communities and machine learning.利用人工合成群落和机器学习来识别对植物保护重要的微生物群落模式。
Nat Commun. 2023 Dec 2;14(1):7983. doi: 10.1038/s41467-023-43793-z.
6
Metabolic exchanges are ubiquitous in natural microbial communities.代谢交换在自然微生物群落中无处不在。
Nat Microbiol. 2023 Dec;8(12):2244-2252. doi: 10.1038/s41564-023-01511-x. Epub 2023 Nov 23.
7
Transitivity and intransitivity in soil bacterial networks.土壤细菌网络中的及物性和不及物性。
ISME J. 2023 Dec;17(12):2135-2139. doi: 10.1038/s41396-023-01540-8. Epub 2023 Oct 19.
8
Metabolic network construction reveals probiotic-specific alterations in the metabolic activity of a synthetic small intestinal community.代谢网络构建揭示了益生菌对合成小肠群落代谢活性的特异性改变。
mSystems. 2023 Oct 26;8(5):e0033223. doi: 10.1128/msystems.00332-23. Epub 2023 Sep 5.
9
A three-species synthetic community model whose rapid response to antagonism allows the study of higher-order dynamics and emergent properties in minutes.一种三物种合成群落模型,其对拮抗作用的快速反应使得能够在数分钟内研究高阶动力学和涌现特性。
Front Microbiol. 2023 Jun 2;14:1057883. doi: 10.3389/fmicb.2023.1057883. eCollection 2023.
10
Patterns in soil microbial diversity across Europe.欧洲土壤微生物多样性模式。
Nat Commun. 2023 Jun 8;14(1):3311. doi: 10.1038/s41467-023-37937-4.