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宏基因组揭示猪肠道中微生物介导的微塑料降解途径:解决微塑料环境挑战的希望

Macrogenomes reveal microbial-mediated microplastic degradation pathways in the porcine gut: a hope for solving the environmental challenges of microplastics.

作者信息

Wang Tao, Luo Yuheng, Yu Bing, Zheng Ping, Huang Zhiqing, Mao Xiangbing, Yu Jie, Luo Junqiu, Yan Hui, He Jun

机构信息

Institute of Animal Nutrition, Sichuan Agricultural University, Chengdu, China.

Key Laboratory of Animal Disease-Resistant Nutrition, Chengdu, China.

出版信息

Front Microbiol. 2024 Jul 29;15:1442946. doi: 10.3389/fmicb.2024.1442946. eCollection 2024.

DOI:10.3389/fmicb.2024.1442946
PMID:39135878
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11317255/
Abstract

It is increasingly recognized that microplastics (MPs) are being transmitted through the food chain system, but little is known about the microorganisms involved in MP degradation, functional biodegradation genes, and metabolic pathways of degradation in the intestinal tract of foodborne animals. In this study, we explored the potential flora mainly involved in MP degradation in the intestinal tracts of Taoyuan, Duroc, and Xiangcun pigs by macrogenomics, screened relevant MP degradation genes, and identified key enzymes and their mechanisms. The pig colon was enriched with abundant MP degradation-related genes, and gut microorganisms were their main hosts. The fiber diet did not significantly affect the abundance of MP degradation-related genes but significantly reduced their diversity. We identified a total of 94 functional genes for MP degradation and classified them into 27 categories by substrate type, with polystyrene (PS), polyethylene terephthalate (PET), and di(2-ethylhexyl) phthalate (DEHP) were the most predominant degradation types. The MP degradation functional genes were widely distributed in a variety of bacteria, mainly in the phylum and . Based on the identified functional genes for MP degradation, we proposed a hypothetical degradation mechanism for the three major MP pollutants, namely, PS, PET, and DEHP, which mainly consist of oxidoreductase, hydrolase, transferase, ligase, laccase, and isomerase. The degradation process involves the breakdown of long polymer chains, the oxidation of short-chain oligomers, the conversion of catechols, and the achievement of complete mineralization. Our findings provide insights into the function of MP degradation genes and their host microorganisms in the porcine colon.

摘要

人们越来越认识到微塑料(MPs)正在通过食物链系统传播,但对于参与MP降解的微生物、功能性生物降解基因以及食源动物肠道中的降解代谢途径知之甚少。在本研究中,我们通过宏基因组学探索了桃园猪、杜洛克猪和香村猪肠道中主要参与MP降解的潜在菌群,筛选了相关的MP降解基因,并鉴定了关键酶及其作用机制。猪结肠中富含大量与MP降解相关的基因,肠道微生物是这些基因的主要宿主。纤维饮食对MP降解相关基因的丰度没有显著影响,但显著降低了它们的多样性。我们共鉴定出94个MP降解功能基因,并根据底物类型将它们分为27类,其中聚苯乙烯(PS)、聚对苯二甲酸乙二酯(PET)和邻苯二甲酸二(2-乙基己基)酯(DEHP)是最主要的降解类型。MP降解功能基因广泛分布于多种细菌中,主要存在于门和门中。基于鉴定出的MP降解功能基因,我们提出了三种主要MP污染物,即PS、PET和DEHP的假设降解机制,主要由氧化还原酶、水解酶、转移酶、连接酶、漆酶和异构酶组成。降解过程包括长聚合物链的断裂、短链低聚物的氧化、儿茶酚的转化以及实现完全矿化。我们的研究结果为MP降解基因及其宿主微生物在猪结肠中的功能提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/158885a202df/fmicb-15-1442946-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/d1803201e2ff/fmicb-15-1442946-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/27947673e245/fmicb-15-1442946-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/d72c94fdfdf0/fmicb-15-1442946-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/669e7caaf133/fmicb-15-1442946-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/f844d99f3fe9/fmicb-15-1442946-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/158885a202df/fmicb-15-1442946-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/d1803201e2ff/fmicb-15-1442946-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/27947673e245/fmicb-15-1442946-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/d72c94fdfdf0/fmicb-15-1442946-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/669e7caaf133/fmicb-15-1442946-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/f844d99f3fe9/fmicb-15-1442946-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39b9/11317255/158885a202df/fmicb-15-1442946-g006.jpg

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