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Exploring the molecular landscape of osteosarcoma through PTTG family genes using a detailed multi-level methodology.

作者信息

Lu Yulin, Wang Danjun, Chen Guoao, Shan Zitong, Li Dongmei

机构信息

School of Medicine, Shihezi University, Shihezi, Xinjiang, China.

Key Laboratory of Xinjiang Endemic and Ethnic Diseases, School of Medicine, Shihezi University, Shihezi, Xinjiang, China.

出版信息

Front Genet. 2024 Jul 30;15:1431668. doi: 10.3389/fgene.2024.1431668. eCollection 2024.


DOI:10.3389/fgene.2024.1431668
PMID:39139816
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11319144/
Abstract

BACKGROUND: Osteosarcoma (OS) poses a significant clinical challenge, necessitating a comprehensive exploration of its molecular underpinnings. METHODS: This study explored the roles of PTTG family genes (PTTG1, PTTG2, and PTTG3P) in OS, employing a multifaceted approach encompassing molecular experiments, including OS cell lines culturing, RT-qPCR, bisulfite and Whole Exome Sequencing (WES) and experiments, including The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets-based validation, overall survival, gene enrichment, functional assays, and molecular docking analyses. RESULTS: Our findings reveal a consistent up-regulation of PTTG genes in OS cell lines, supported by RT-qPCR experiments and corroborated across various publically available expression datasets databases. Importantly, ROC curve analyses highlight their potential as diagnostic markers. Moving beyond expression profiles, we unveil the epigenetic landscape by demonstrating significant hypomethylation of CpG islands associated with PTTG genes in OS. The negative correlation between methylation status and mRNA expression emphasizes the regulatory role of promoter methylation in PTTG gene expression. Contrary to expectations, genetic mutations in PTTG genes are rare in OS, with only benign mutations observed. Moreover, functional assays also confirmed the oncogenic roles of the PTTG gene in the development of OS. Lastly, we also revealed that Calcitriol is the most appropriate drug that can be utilized to treat OS in the context of PTTG genes. CONCLUSION: The identification of PTTG genes as potential diagnostic markers and their association with epigenetic alterations opens new avenues for understanding OS pathogenesis and developing targeted therapies. As we navigate the complex landscape of OS, this study contributes essential insights that may pave the way for improved diagnostic and therapeutic strategies in its management.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/656c937a22b1/fgene-15-1431668-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/6d00506a3803/fgene-15-1431668-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/a5b738644ea8/fgene-15-1431668-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/2d66f5c7fef3/fgene-15-1431668-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/f600d64e185f/fgene-15-1431668-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/d7dadcaf8254/fgene-15-1431668-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/656c937a22b1/fgene-15-1431668-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/6d00506a3803/fgene-15-1431668-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/a5b738644ea8/fgene-15-1431668-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/2d66f5c7fef3/fgene-15-1431668-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/f600d64e185f/fgene-15-1431668-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/d7dadcaf8254/fgene-15-1431668-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/214b/11319144/656c937a22b1/fgene-15-1431668-g006.jpg

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[1]
Deciphering Glioblastoma: Fundamental and Novel Insights into the Biology and Therapeutic Strategies of Gliomas.

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[2]
Exploring the potential of P-glycoprotein inhibitors in the targeted delivery of anti-cancer drugs: A comprehensive review.

Eur J Pharm Biopharm. 2024-5

[3]
Identification and validation of IRF6 related to ovarian cancer and biological function and prognostic value.

J Ovarian Res. 2024-3-16

[4]
A multi-dimensional approach to unravel the intricacies of lactylation related signature for prognostic and therapeutic insight in colorectal cancer.

J Transl Med. 2024-2-28

[5]
The role of long non-coding RNA in hepatocellular carcinoma.

Aging (Albany NY). 2024-2-8

[6]
Modulation of the vitamin D receptor by traditional Chinese medicines and bioactive compounds: potential therapeutic applications in VDR-dependent diseases.

Front Pharmacol. 2024-1-22

[7]
Prognostic model development and molecular subtypes identification in bladder urothelial cancer by oxidative stress signatures.

Aging (Albany NY). 2024-2-1

[8]
Nano-Based Drug Delivery Systems: Potential Developments in the Therapy of Metastatic Osteosarcoma-A Narrative Review.

Pharmaceutics. 2023-12-1

[9]
Efficacy of tumour-treating fields therapy in recurrent glioblastoma: A narrative review of current evidence.

Medicine (Baltimore). 2023-12-1

[10]
Do alkaline phosphatases have great potential in the diagnosis, prognosis, and treatment of tumors?

Transl Cancer Res. 2023-10-31

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