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新种和新种,以及重新分类为后来的异型同义词。

sp. nov. and sp. nov., and reclassification of , , and as later heterotypic synonyms of , , and .

机构信息

Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2024 Aug;74(8). doi: 10.1099/ijsem.0.006491.

Abstract

Two Gram-negative, obligately aerobic, rod-shaped bacteria, strains G1-22 and G1-23, were isolated from the phycosphere of a marine brown alga. Both strains exhibited catalase- and oxidase-positive activities. Strain G1-22 displayed optimal growth at 25 °C, pH 8.0, and 2.0-3.0% (w/v) NaCl, while strain G1-23 exhibited optimal growth at 25 °C, pH 8.0, and 4.0% NaCl. Ubiquinone-8 was identified as the sole isoprenoid quinone in both strains. As major fatty acids (> 5%), strain G1-22 contained C, summed feature 3 (C 7 and/or C 6), summed feature 8 (C 7 and/or C 6), C 3-OH, and C 3-OH, while strain G1-23 contained C, summed feature 3 (C 7 and/or C 6), and C. Phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol were major polar lipids in both strains. Strains G1-22 and G1-23 had DNA G+C contents of 40.2 and 38.9 mol%, respectively. Phylogenetic analyses based on 16S rRNA and genome sequences revealed that strains G1-22 and G1-23 formed distinct phylogenetic lineages within the genera and , respectively. Strain G1-22 showed closest relatedness to MTZ26 with 97.8% 16S rRNA gene sequence similarity, 70.2% average nucleotide identity (ANI), and a 21.5% digital DNA-DNA hybridization (dDDH) value, while strain G1-23 was most closely related to KCTC 32108 with 95.6% 16S rRNA gene sequence similarity, 74.6% ANI, and a 20.1% dDDH value. Based on phenotypic and molecular characteristics, strains G1-22 and G1-23 are proposed to represent two novel species, namely sp. nov. (type strain G1-22=KACC 22486=JCM 34971) and sp. nov. (type strain G1-23=KACC 22490=JCM 34972), respectively. Additionally, based on the comparison of whole genome sequences, it is proposed that , , and are reclassified as later heterotypic synonyms of , , and , respectively.

摘要

两株革兰氏阴性、严格需氧的杆状细菌,菌株 G1-22 和 G1-23,从海洋褐藻的藻际中分离得到。两株菌均表现出过氧化氢酶和氧化酶阳性活性。菌株 G1-22 在 25°C、pH8.0 和 2.0-3.0%(w/v)NaCl 下生长最佳,而菌株 G1-23 在 25°C、pH8.0 和 4.0%NaCl 下生长最佳。两种菌均鉴定出唯一的类异戊二烯醌为泛醌-8。作为主要脂肪酸(>5%),菌株 G1-22 含有 C、特征 3 总和(C7 和/或 C6)、特征 8 总和(C7 和/或 C6)、C3-OH 和 C3-OH,而菌株 G1-23 含有 C、特征 3 总和(C7 和/或 C6)和 C。磷脂酰乙醇胺、磷脂酰甘油和双磷脂酰甘油是两种菌的主要极性脂。菌株 G1-22 和 G1-23 的 DNA G+C 含量分别为 40.2mol%和 38.9mol%。基于 16S rRNA 和基因组序列的系统发育分析表明,菌株 G1-22 和 G1-23 分别在属和属内形成了独特的进化枝。菌株 G1-22 与 MTZ26 具有最高的亲缘关系,16S rRNA 基因序列相似性为 97.8%,平均核苷酸同一性(ANI)为 70.2%,数字 DNA-DNA 杂交(dDDH)值为 21.5%,而菌株 G1-23 与 KCTC 32108 具有最高的亲缘关系,16S rRNA 基因序列相似性为 95.6%,ANI 为 74.6%,dDDH 值为 20.1%。基于表型和分子特征,菌株 G1-22 和 G1-23 被提议分别代表两个新的种,即 sp. nov.(模式菌株 G1-22=KACC 22486=JCM 34971)和 sp. nov.(模式菌株 G1-23=KACC 22490=JCM 34972)。此外,基于全基因组序列的比较,提议将 、 和 重新分类为 、 和 的异型同义词。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d9/11324256/9d13424a40ff/ijsem-74-06491-g001.jpg

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