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药物遗传学中的双重方法:开发用于HLA - B*13:01筛查的PCR - SSP和RT - PCR方法以预防氨苯砜和复方新诺明严重皮肤不良反应。

Dual approaches in pharmacogenetics: Developing PCR-SSP and RT-PCR methods for HLA-B*13:01 screening to prevent dapsone and Co-trimoxazole SCARs.

作者信息

Attapong Jirapat, Kaset Chollanot, Nakkam Nontaya, Tassaneeyakul Wichittra, Wichukchinda Nuanjun, Chomean Sirinart

机构信息

Graduate Program in Biomedical Sciences, Faculty of Allied Health Sciences, Thammasat University, Pathumthani, Thailand.

Thammasat University Research Unit in Medical Technology and Precision Medicine Innovation, Thailand.

出版信息

Heliyon. 2024 Jul 22;10(15):e34977. doi: 10.1016/j.heliyon.2024.e34977. eCollection 2024 Aug 15.

DOI:10.1016/j.heliyon.2024.e34977
PMID:39144953
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11320476/
Abstract

Dapsone and co-trimoxazole are potent antibiotics for treating various infections and inflammations. However, several studies reported the strongly association between severe cutaneous adverse drug reactions (SCARs) to both drugs and the HLA-B13:01 allele. Rapid and reliable screening for the HLA-B13:01 allele can mitigate the risk of dapsone-induced SCARs. We developed two methods, multiplex sequence-specific primer PCR (PCR-SSP) and real-time PCR (RT-PCR), tailored for different clinical settings. These methods were optimized to minimize false positives among the Thai population. Clinical validation demonstrated excellent reproducibility, with both methods showing 100 % concordance in repeated tests. PCR-SSP achieved a limit of detection as low as 100 pg of genomic DNA, while RT-PCR reached 1 pg. Overall statistical accuracy was 100.00 % (95 % CI: 98.18 %-100.00 %). Screening for drug-related HLA alleles is crucial for reducing mortality from severe cutaneous adverse drug reactions, especially dapsone hypersensitivity syndrome (DHS) and dapsone-induced hypersensitivity reactions (DIHRs). Our screening approach for dapsone can also be extended to co-trimoxazole, representing a significant advancement in personalized medicine and preemptive pharmacogenetic testing for tailored patient care and safety, albeit further validation in diverse ethnic populations is warranted to ensure universal applicability.

摘要

氨苯砜和复方新诺明是治疗各种感染和炎症的强效抗生素。然而,多项研究报告了这两种药物引起的严重皮肤不良反应(SCARs)与HLA - B13:01等位基因之间的强关联。对HLA - B13:01等位基因进行快速可靠的筛查可以降低氨苯砜诱导的SCARs风险。我们开发了两种方法,即多重序列特异性引物PCR(PCR - SSP)和实时PCR(RT - PCR),针对不同临床场景进行了定制。这些方法经过优化以尽量减少泰国人群中的假阳性。临床验证显示出极佳的重现性,两种方法在重复测试中均显示出100%的一致性。PCR - SSP的检测限低至100 pg基因组DNA,而RT - PCR达到1 pg。总体统计准确率为100.00%(95%CI:98.18% - 100.00%)。筛查与药物相关的HLA等位基因对于降低严重皮肤不良反应的死亡率至关重要,尤其是氨苯砜超敏综合征(DHS)和氨苯砜诱导的超敏反应(DIHRs)。我们针对氨苯砜的筛查方法也可扩展至复方新诺明,这代表了个性化医疗以及为实现个性化患者护理与安全而进行的先发药物遗传学检测方面的重大进展,尽管需要在不同种族人群中进行进一步验证以确保普遍适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/c2870013f7e3/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/870ad608517b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/72c0252cf226/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/0add57f95c75/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/e1b270de897a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/80aa246a0e31/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/c2870013f7e3/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/870ad608517b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/72c0252cf226/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/0add57f95c75/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/e1b270de897a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/80aa246a0e31/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e320/11320476/c2870013f7e3/gr6.jpg

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本文引用的文献

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J Med Econ. 2023 Jan-Dec;26(1):1330-1341. doi: 10.1080/13696998.2023.2270868. Epub 2023 Oct 25.
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Genotypic and Phenotypic Characteristics of Co-Trimoxazole-Induced Cutaneous Adverse Reactions.复方新诺明诱导的皮肤不良反应的表型和基因型特征。
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A single-tube multiplex real-time PCR for genotype by detecting highly specific SNPs.
一种单管多重实时 PCR 方法,通过检测高度特异性 SNP 来进行基因分型。
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Dapsone, More than an Effective Neuro and Cytoprotective Drug.氨苯砜:一种有效的神经和细胞保护药物。
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Is a Predictive Marker of Dapsone-Induced Severe Cutaneous Adverse Reactions in Thai Patients.是泰国患者中导致严重皮肤不良反应的预测标志物。
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Validation study of HLA-B*13:01 as a biomarker of dapsone hypersensitivity syndrome in leprosy patients in Indonesia.验证 HLA-B*13:01 作为印度尼西亚麻风病患者中氨苯砜超敏综合征生物标志物的研究。
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