Osbourne Romani, Thayer Kelly M
Department of Molecular Biology & Biochemistry, Wesleyan University, Middletown, Connecticut, United States of America.
College of Integrative Sciences, Wesleyan University, Middletown, Connecticut, United States of America.
bioRxiv. 2024 Aug 6:2024.08.05.606567. doi: 10.1101/2024.08.05.606567.
The accumulation of senescent cells induces several aging phenotypes, and the p53 tumor suppressor protein regulates one of the two known cellular senescence pathways. p53's regulation of senescence is however not clear. For example, p53 deficiency in some mice has been shown to rescue premature aging while others display significant aging phenotype when p53-deficient. This study seeks to elucidate, structurally and mechanistically, p53's roles in longevity. Through a relative evolutionary scoring (RES) algorithm, we quantify the level of evolutionary change in the residues of p53 across organisms of varying average lifespans in six taxonomic orders. Secondly, we used PEPPI to assess the likelihood of interaction between p53-or p53-linked proteins-and known senescence-regulating proteins across organisms in the orders Primates and Perciformes. Our RES algorithm found variations in the alignments within and across orders, suggesting that mechanisms of p53-mediated regulation of longevity may vary. PEPPI results suggest that longer-lived species may have evolved to regulate induction and inhibition of cellular senescence better than their shorter-lived counterparts. With experimental verification, these predictions could help elucidate the mechanisms of p53-mediated cellular senescence, ultimately clarifying our understanding of p53's connection to aging in a multiple-species context.
衰老细胞的积累会引发多种衰老表型,而p53肿瘤抑制蛋白调控着已知的两条细胞衰老途径之一。然而,p53对衰老的调控尚不清楚。例如,一些小鼠中p53的缺失已被证明可挽救早衰,而另一些小鼠在p53缺失时则表现出明显的衰老表型。本研究旨在从结构和机制上阐明p53在寿命方面的作用。通过一种相对进化评分(RES)算法,我们量化了六个分类目中不同平均寿命的生物体中p53残基的进化变化水平。其次,我们使用PEPPI评估了灵长目和鲈形目中不同生物体中p53或与p53相关的蛋白质与已知衰老调节蛋白之间相互作用的可能性。我们的RES算法发现不同目内和不同目之间的比对存在差异,这表明p53介导的寿命调节机制可能有所不同。PEPPI结果表明,寿命较长的物种可能已经进化出比寿命较短的物种更好地调节细胞衰老诱导和抑制的能力。经过实验验证,这些预测可能有助于阐明p53介导的细胞衰老机制,最终在多物种背景下澄清我们对p53与衰老之间联系的理解。