Ruskin Pinky, Pandi Chandra, Kannan Balachander, Pandi Anitha, A S Smiline Girija, Jayaseelan Vijayashree Priyadharsini, Arumugam Paramasivam
Microbiology, Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, IND.
Molecular Biology Lab, Centre for Cellular and Molecular Research, Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, IND.
Cureus. 2024 Jul 16;16(7):e64640. doi: 10.7759/cureus.64640. eCollection 2024 Jul.
Background Triggering receptor expression on myeloid cells-1 (TREM1) belongs to the immunoglobulin superfamily and is implicated in various conditions, including infectious and non-infectious diseases, autoimmune disorders, and cancer. Notably, TREM1 is significantly dysregulated in numerous cancer types. However, the underlying mechanism driving TREM1 mRNA expression in cancers remains unclear. Objective This study aims to analyze the promoter methylation level of TREM1 and its overexpression with cancer. Methods This study utilized The Cancer Genome Atlas (TCGA) cohort to analyze the methylation and expression levels of TREM1 in cancers. The University of ALabama at Birmingham CANcer (UALCAN) database facilitated data analysis from the TCGA dataset. Additionally, survival analysis was conducted using the TCGA dataset via Kaplan-Meier (KM) plots to identify significant associations with prognosis. Results Promoter methylation analysis revealed that TREM1 is hypomethylated in cancers, resulting in significantly overexpressed mRNA across various cancer types. This methylation and expression showed a negative correlation. Furthermore, high TREM1 mRNA expression was linked to poor prognosis in several cancers. Conclusion TREM1 gene expression negatively correlates with promotor DNA methylation and is associated with poor survival. It may serve as a prognostic marker and biomarker for various cancers. Future research should focus on further validation and antitumor immunity to elucidate its oncogenic role in cancers.
背景 髓系细胞触发受体-1(TREM1)属于免疫球蛋白超家族,与多种疾病有关,包括感染性和非感染性疾病、自身免疫性疾病以及癌症。值得注意的是,TREM1在多种癌症类型中显著失调。然而,驱动TREM1 mRNA在癌症中表达的潜在机制仍不清楚。 目的 本研究旨在分析TREM1的启动子甲基化水平及其在癌症中的过表达情况。 方法 本研究利用癌症基因组图谱(TCGA)队列分析癌症中TREM1的甲基化和表达水平。阿拉巴马大学伯明翰分校癌症(UALCAN)数据库有助于对TCGA数据集进行数据分析。此外,通过Kaplan-Meier(KM)图使用TCGA数据集进行生存分析,以确定与预后的显著关联。 结果 启动子甲基化分析显示,TREM1在癌症中低甲基化,导致在各种癌症类型中mRNA显著过表达。这种甲基化和表达呈负相关。此外,高TREM1 mRNA表达与几种癌症的不良预后相关。 结论 TREM1基因表达与启动子DNA甲基化呈负相关,并与不良生存相关。它可能作为各种癌症的预后标志物和生物标志物。未来的研究应集中在进一步验证和抗肿瘤免疫方面,以阐明其在癌症中的致癌作用。