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通过高通量虚拟筛选和体外筛选鉴定新型抗利什曼原虫化学型。

Identification of Novel Antileishmanial Chemotypes By High-Throughput Virtual and In Vitro Screening.

机构信息

Department of Biochemistry, Abdul Wali Khan University Mardan, Mardan, Pakistan.

Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Shaqra Univesity, Al-Quwayiyah-19257, Riyadh, Saudi Arabia.

出版信息

Acta Parasitol. 2024 Sep;69(3):1439-1457. doi: 10.1007/s11686-024-00899-8. Epub 2024 Aug 16.

Abstract

BACKGROUND

Leishmaniasis is a deadly protozoan parasitic disease and a significant health problem in underdeveloped and developing countries. The global spread of the parasite, coupled with the emergence of drug resistance and severe side effects associated with existing treatments, has necessitated the identification of new and potential drugs.

OBJECTIVE

This study aimed to identify promising compounds for the treatment of leishmaniasis by targeting two essential enzymes of Leishmania donovani: trypanothione reductase (Try-R) and trypanothione synthetase (Try-S).

METHODS

High-throughput virtual and in vitro screening of in-house and commercial databases was conducted. A pharmacophore model with seven features was developed and validated using the Guner-Henery method. The pharmacophore-based virtual screening yielded 690 hits, which were further filtered through Lipinski's rule, ADMET analysis, and molecular docking against Try-R and Try-S. Molecular dynamics studies were performed on selected compounds, and in vitro experiments were conducted to evaluate their activity against the promastigote and amastigote forms of L. donovani.

RESULTS

The virtual screening and subsequent analysis identified 33 promising compounds. Molecular dynamics studies of two compounds (comp-1 and comp-2) demonstrated stable binding interactions with the target enzymes and high affinity. In vitro experiments revealed that 13 compounds exhibited moderate activity against both the promastigote (IC, 41 µM-76 µM) and the amastigote (IC, 44 µM-72 µM) forms of L. donovani. Compounds 1 and 2 showed the highest percent inhibition and the lowest IC values.

CONCLUSION

The identified compounds demonstrated significant inhibitory activity against Leishmania donovani and stable interactions with target enzymes. These findings suggest that the compounds could serve as promising leads for developing new treatments for leishmaniasis.

摘要

背景

利什曼病是一种致命的原生动物寄生虫病,也是不发达和发展中国家的一个重大健康问题。寄生虫的全球传播,加上现有治疗方法出现的耐药性和严重副作用,使得必须确定新的和有潜力的药物。

目的

本研究旨在通过针对利什曼原虫的两种必需酶:硫醇还原酶(Try-R)和硫醇合成酶(Try-S),来鉴定治疗利什曼病的有前途的化合物。

方法

对内部和商业数据库进行了高通量虚拟和体外筛选。使用 Guner-Henery 方法开发并验证了具有七个特征的药效团模型。基于药效团的虚拟筛选产生了 690 个命中物,这些命中物进一步通过 Lipinski 规则、ADMET 分析和针对 Try-R 和 Try-S 的分子对接进行过滤。对选定的化合物进行了分子动力学研究,并进行了体外实验以评估它们对利什曼原虫的前鞭毛体和无鞭毛体形式的活性。

结果

虚拟筛选和随后的分析确定了 33 种有前途的化合物。两种化合物(comp-1 和 comp-2)的分子动力学研究表明,它们与靶酶具有稳定的结合相互作用和高亲和力。体外实验表明,13 种化合物对前鞭毛体(IC,41µM-76µM)和无鞭毛体(IC,44µM-72µM)均表现出中等活性。化合物 1 和 2 表现出最高的抑制百分比和最低的 IC 值。

结论

鉴定出的化合物对利什曼原虫具有显著的抑制活性,并与靶酶具有稳定的相互作用。这些发现表明,这些化合物可能成为开发治疗利什曼病的新疗法的有前途的先导化合物。

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