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一种探索非核糖体肽合成中缩合结构域特异性的体外分析方法。

An in vitro assay to explore condensation domain specificity from non-ribosomal peptide synthesis.

机构信息

Department of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, Australia; EMBL Australia, Monash University, Clayton, VIC, Australia; ARC Centre of Excellence for Innovations in Peptide and Protein Science.

Department of Chemistry, University of Warwick, Coventry, United Kingdom.

出版信息

Methods Enzymol. 2024;702:89-119. doi: 10.1016/bs.mie.2024.06.010. Epub 2024 Jul 20.

Abstract

Non-ribosomal peptide synthesis produces a wide range of bioactive peptide natural products and is reliant on a modular architecture based on repeating catalytic domains able to generate diverse peptide sequences. In this chapter we detail an in vitro biochemical assay to explore the substrate specificity of condensation domains, which are responsible for peptide elongation, from the biosynthetic machinery that produces from the siderophore fuscachelin. This assay removes the requirement to utilise the specificity of adjacent adenylation domains and allows the acceptance of a wide range of synthetic substrates to be explored.

摘要

非核糖体肽合成产生广泛的生物活性肽天然产物,依赖于基于重复催化结构域的模块化架构,这些结构域能够产生多种肽序列。在本章中,我们详细介绍了一种体外生化测定法,用于探索生物合成机制中负责肽伸长的缩合结构域的底物特异性,该机制产生铁载体fuscachelin。该测定法消除了利用相邻氨酰化结构域特异性的要求,并允许探索广泛的合成底物的接受。

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