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单样本基因集富集分析揭示了免疫相关基因在卵巢癌中的临床意义。

Single-sample gene set enrichment analysis reveals the clinical implications of immune-related genes in ovarian cancer.

作者信息

Gong Weiwei, Kuang Mingqin, Chen Hongxi, Luo Yiheng, You Keli, Zhang Bin, Liu Yueyang

机构信息

Department of Hematology and Oncology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, China.

Gynecology and Oncology Department of Ganzhou Cancer Hospital, Ganzhou, Jiangxi, China.

出版信息

Front Mol Biosci. 2024 Aug 5;11:1426274. doi: 10.3389/fmolb.2024.1426274. eCollection 2024.

DOI:10.3389/fmolb.2024.1426274
PMID:39161779
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11330791/
Abstract

PURPOSE

Ovarian cancer (OC) is a common gynecological malignancy with poor prognosis and substantial tumor heterogeneity. Due to the complex tumor immune microenvironment (TIME) among ovarian cancer, only a few patients have an immune response to immunotherapy. To investigate the differences in immune function and identify potential biomarkers in OC, we established a prognostic risk scoring model (PRSM) with differential expression of immune-related genes (IRGs) to identify critical prognostic IRG signatures.

METHODS

Single-sample gene set enrichment analysis (ssGSEA) was used to investigate the infiltration of various immune cells in 372 OC patients. Then, COX regression analysis and Lasso regression analysis were used to screen IRGs and construct PRSM. Next, the immunotherapy sensitivity of different risk groups regarding the immune checkpoint expression and tumor mutation burden was evaluated. Finally, a nomogram was created to guide the clinical evaluation of the patient prognosis.

RESULTS

In this study, 320 immune-related genes (IRGs) were identified, 13 of which were selectively incorporated into a Prognostic Risk Scoring Model (PRSM). This model revealed that the patients in the high-risk group were characterized as having poorer prognosis, lower expression of immune checkpoints, and decreased tumor mutation load levels compared with those in the low-risk group. The nomogram based on the risk score can distinguish the risk subtypes and individual prognosis of patients with OC. Additionally, M1 macrophages may be the critical target for immunotherapy in OC patients.

CONCLUSION

With the in-depth analysis of the immune microenvironment of OC, the PRSM was constructed to predict the OC patient prognosis and identify the subgroup of the patients benefiting from immunotherapy.

摘要

目的

卵巢癌(OC)是一种常见的妇科恶性肿瘤,预后较差且肿瘤异质性显著。由于卵巢癌中复杂的肿瘤免疫微环境(TIME),只有少数患者对免疫疗法有免疫反应。为了研究免疫功能的差异并确定OC中的潜在生物标志物,我们建立了一个具有免疫相关基因(IRG)差异表达的预后风险评分模型(PRSM),以识别关键的预后IRG特征。

方法

采用单样本基因集富集分析(ssGSEA)研究372例OC患者中各种免疫细胞的浸润情况。然后,使用COX回归分析和Lasso回归分析筛选IRG并构建PRSM。接下来,评估不同风险组在免疫检查点表达和肿瘤突变负担方面的免疫治疗敏感性。最后,创建了一个列线图以指导对患者预后的临床评估。

结果

在本研究中,共鉴定出320个免疫相关基因(IRG),其中13个被选择性纳入预后风险评分模型(PRSM)。该模型显示,与低风险组相比,高风险组患者的预后较差,免疫检查点表达较低,肿瘤突变负荷水平降低。基于风险评分的列线图可以区分OC患者的风险亚型和个体预后。此外,M1巨噬细胞可能是OC患者免疫治疗的关键靶点。

结论

通过对OC免疫微环境的深入分析,构建了PRSM以预测OC患者的预后,并识别受益于免疫治疗的患者亚组。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/82823a7afde0/fmolb-11-1426274-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/dfec3ffb881e/fmolb-11-1426274-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/3e05889176b9/fmolb-11-1426274-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/f9f2b00e1c31/fmolb-11-1426274-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/cb9c1a090db9/fmolb-11-1426274-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/cfe702466a58/fmolb-11-1426274-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/c4d97f5c8415/fmolb-11-1426274-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/d96192686386/fmolb-11-1426274-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/82823a7afde0/fmolb-11-1426274-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/dfec3ffb881e/fmolb-11-1426274-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/3e05889176b9/fmolb-11-1426274-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/f9f2b00e1c31/fmolb-11-1426274-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/cb9c1a090db9/fmolb-11-1426274-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/cfe702466a58/fmolb-11-1426274-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/c4d97f5c8415/fmolb-11-1426274-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/d96192686386/fmolb-11-1426274-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53e3/11330791/82823a7afde0/fmolb-11-1426274-g008.jpg

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Cell. 2024 Sep 5;187(18):4905-4925.e24. doi: 10.1016/j.cell.2024.06.013. Epub 2024 Jul 5.
2
Analysis of the Polymorphisms and Expression Levels of the BCL2, BAX and c-MYC Genes in Patients with Ovarian Cancer.分析卵巢癌患者中 BCL2、BAX 和 c-MYC 基因的多态性和表达水平。
Int J Mol Sci. 2023 Nov 14;24(22):16309. doi: 10.3390/ijms242216309.
3
Mutation Is Associated with Increased Tumor Mutation Burden and Immune Cell Infiltration in Ovarian Cancer.
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Int J Mol Sci. 2023 Sep 18;24(18):14212. doi: 10.3390/ijms241814212.
4
Endoplasmic Reticulum Stress-Related Ten-Biomarker Risk Classifier for Survival Evaluation in Epithelial Ovarian Cancer and : A Potential Therapeutic Target of Ovarian Cancer.内质网应激相关的十标志物风险分类器用于上皮性卵巢癌的生存评估:卵巢癌的潜在治疗靶点。
Int J Mol Sci. 2023 Sep 12;24(18):14010. doi: 10.3390/ijms241814010.
5
Cancer statistics, 2023.癌症统计数据,2023 年。
CA Cancer J Clin. 2023 Jan;73(1):17-48. doi: 10.3322/caac.21763.
6
Ovarian cancer mutational processes drive site-specific immune evasion.卵巢癌突变过程驱动特定部位的免疫逃逸。
Nature. 2022 Dec;612(7941):778-786. doi: 10.1038/s41586-022-05496-1. Epub 2022 Dec 14.
7
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8
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Sci Rep. 2022 Oct 7;12(1):16842. doi: 10.1038/s41598-022-20811-6.
9
NCCN Guidelines® Insights: Ovarian Cancer, Version 3.2022.NCCN 指南®洞察:卵巢癌,第 3.2022 版。
J Natl Compr Canc Netw. 2022 Sep;20(9):972-980. doi: 10.6004/jnccn.2022.0047.
10
Reshaping the systemic tumor immune environment (STIE) and tumor immune microenvironment (TIME) to enhance immunotherapy efficacy in solid tumors.重塑系统性肿瘤免疫环境(STIE)和肿瘤免疫微环境(TIME),以增强实体瘤的免疫治疗效果。
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