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对从健康奶牛的生牛奶中分离出的益生菌菌株进行全基因组测序。

Whole-genome sequencing of probiotic strains isolated from raw milk of healthy cows.

作者信息

Rahman Md Morshedur, Siddique Naim, Rahman Anm Aminoor, Das Ziban Chandra, Islam Tofazzal, Hoque M Nazmul

机构信息

Molecular Biology and Bioinformatics Laboratory, Department of Gynaecology, Obstetrics and Reproductive Health, Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU), Gazipur, Bangladesh.

Institute of Biotechnology and Genetic Engineering (IBGE), BSMRAU, Gazipur, Bangladesh.

出版信息

Microbiol Resour Announc. 2024 Sep 10;13(9):e0046524. doi: 10.1128/mra.00465-24. Epub 2024 Aug 20.

Abstract

We report the draft genomes of two strains MBBL1 and MBBL2, isolated from raw milk of healthy cows. The genome of MBBL1 is 2,681,695 bp with 57.41× coverage, and MBBL2 is 2,681,119 bp with 99.81× coverage, spanned across 14 and 13 contigs, respectively.

摘要

我们报告了从健康奶牛的生牛奶中分离出的两株菌株MBBL1和MBBL2的基因组草图。MBBL1的基因组为2,681,695碱基对,覆盖度为57.41倍,MBBL2的基因组为2,681,119碱基对,覆盖度为99.81倍,分别跨越14个和13个重叠群。

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本文引用的文献

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Draft genome sequencing of strains isolated from cow milk.从牛奶中分离出的菌株的基因组测序草图。
Microbiol Resour Announc. 2024 Apr 15;13(5):e0023824. doi: 10.1128/mra.00238-24.
2
Complete genome assembly of strain HL1, isolated from an infant fecal sample.从婴儿粪便样本中分离出的HL1菌株的全基因组组装。
Microbiol Resour Announc. 2023 Nov 16;12(11):e0055823. doi: 10.1128/MRA.00558-23. Epub 2023 Oct 31.
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ResFinder 4.0 for predictions of phenotypes from genotypes.ResFinder 4.0 用于基因型到表型的预测。
J Antimicrob Chemother. 2020 Dec 1;75(12):3491-3500. doi: 10.1093/jac/dkaa345.

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