Center for Translational Antiviral Research, Georgia State University Institute for Biomedical Sciences, Atlanta, Georgia, USA.
Antimicrob Agents Chemother. 2024 Oct 8;68(10):e0080024. doi: 10.1128/aac.00800-24. Epub 2024 Aug 20.
Small-molecule antivirals can be used as chemical probes to stabilize transitory conformational stages of viral target proteins, facilitating structural analyses. Here, we evaluate allosteric pneumo- and paramyxovirus polymerase inhibitors that have the potential to serve as chemical probes and aid the structural characterization of short-lived intermediate conformations of the polymerase complex. Of multiple inhibitor classes evaluated, we discuss in-depth distinct scaffolds that were selected based on well-understood structure-activity relationships, insight into resistance profiles, biochemical characterization of the mechanism of action, and photoaffinity-based target mapping. Each class is thought to block structural rearrangements of polymerase domains albeit target sites and docking poses are distinct. This review highlights validated druggable targets in the paramyxo- and pneumovirus polymerase proteins and discusses discrete structural stages of the polymerase complexes required for bioactivity.
小分子抗病毒药物可用作化学探针来稳定病毒靶蛋白的短暂构象阶段,从而促进结构分析。在这里,我们评估了具有作为化学探针潜力的变构性肺病毒和副粘病毒聚合酶抑制剂,以帮助对聚合酶复合物的短暂中间构象进行结构特征描述。在所评估的多种抑制剂类别中,我们深入讨论了根据充分理解的结构-活性关系、对耐药性特征的了解、作用机制的生化特征以及基于光亲和性的靶标定位选择的不同支架。每个类别都被认为可以阻止聚合酶结构域的结构重排,尽管靶标位点和对接构象不同。本综述突出了副粘病毒和肺病毒聚合酶蛋白中已验证的可成药靶标,并讨论了生物活性所需的聚合酶复合物的离散结构阶段。