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巴西中西部肾移植受者中1型人pegivirus病毒(HPgV-1)的分子特征及感染频率

Molecular characterization and frequency of human pegivirus type 1 (HPgV-1) in kidney transplant recipients from Central-West Brazil.

作者信息

da Silva Fábio Gonçalves, Moura Drielly Rodrigues, de Oliveira Pâmela Maria, de Souza Cardoso Quintão Tatyane, Cassemiro Évelin Mota, de Campos Gabriel Montenegro, da Silva Anielly Sarana, Bezerra Rafael Dos Santos, de Noronha Lorena Aparecida Gonçalves, Ramalho Walter Massa, de Araújo Wildo Navegantes, Pereira Alex Leite, Slavov Svetoslav Nanev, Haddad Rodrigo

机构信息

Center for Tropical Medicine, University of Brasília, Federal District, Brasília, Brazil.

Molecular Diagnostics Laboratory, University Hospital of Brasília/EBSERH, Federal District, Brasília, Brazil.

出版信息

Braz J Microbiol. 2024 Dec;55(4):3279-3286. doi: 10.1007/s42770-024-01490-z. Epub 2024 Aug 21.

DOI:10.1007/s42770-024-01490-z
PMID:39164460
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11711997/
Abstract

Human Pegivirus Type 1 (HPgV-1), a ubiquitous commensal virus, has been recently suggested as a marker of immunologic function. There is scarce data for the presence, genotypes, and molecular characteristics of HPgV-1 among kidney transplant recipients. Therefore, the objective of this study was to examine the prevalence and the molecular characteristics (cycle threshold, genotypes) of this viral infection among kidney transplant recipients from the Brasília, Federal District of Brazil. HPgV-1 RNA detection in the plasma was assessed by RT-qPCR. Positive samples were submitted to sequencing and phylogenetic analysis of the 5´-UTR portion of the viral genome. The estimated HPgV-1 prevalence among renal-transplant recipients was 20%. The performed phylogenetic inference revealed that the most frequent genotype among these patients was HPgV-1 genotype 2 (78.9%) presented by its two subgenotypes (2 A and 2B), followed by genotypes 1 and 3 (10.5% each). This study presents new data about the HPgV-1 circulation and molecular characteristics among kidney transplant recipients from the Federal District of Brazil. Further work is fundamental to examine the effect of HPgV-1 among patients with immunological suppression, including kidney transplant recipients.

摘要

人1型佩吉病毒(HPgV-1)是一种普遍存在的共生病毒,最近被认为是免疫功能的一个标志物。关于肾移植受者中HPgV-1的存在情况、基因型和分子特征的数据很少。因此,本研究的目的是调查巴西联邦区巴西利亚肾移植受者中这种病毒感染的患病率和分子特征(循环阈值、基因型)。通过逆转录定量聚合酶链反应(RT-qPCR)评估血浆中HPgV-1 RNA的检测情况。对阳性样本进行病毒基因组5′-非翻译区(5´-UTR)部分的测序和系统发育分析。肾移植受者中HPgV-1的估计患病率为20%。进行的系统发育推断显示,这些患者中最常见的基因型是HPgV-1 2型(78.9%),由其两个亚型(2 A和2B)呈现,其次是1型和3型(各占10.5%)。本研究提供了关于巴西联邦区肾移植受者中HPgV-1传播和分子特征的新数据。进一步的研究对于研究HPgV-1对包括肾移植受者在内的免疫抑制患者的影响至关重要。

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本文引用的文献

1
Human Pegivirus-1 Detection and Genotyping in Brazilian Patients with Fulminant Hepatitis.巴西暴发性肝炎患者中人类pegivirus-1的检测与基因分型
Pathogens. 2023 Sep 1;12(9):1122. doi: 10.3390/pathogens12091122.
2
Clinical and molecular aspects of human pegiviruses in the interaction host and infectious agent.人pegivirus在宿主与感染因子相互作用中的临床和分子方面。
Virol J. 2022 Mar 9;19(1):41. doi: 10.1186/s12985-022-01769-3.
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Review of human pegivirus: Prevalence, transmission, pathogenesis, and clinical implication.人类偏肺病毒综述:流行情况、传播途径、发病机制及临床意义。
Virulence. 2022 Dec;13(1):324-341. doi: 10.1080/21505594.2022.2029328.
4
Human pegivirus type 1 infection in kidney transplant recipients: Replication kinetics and clinical correlates.人类杯状病毒 1 型感染肾移植受者:复制动力学和临床相关性。
Transpl Infect Dis. 2022 Feb;24(1):e13771. doi: 10.1111/tid.13771. Epub 2021 Dec 29.
5
Human pegivirus 1 infection in lung transplant recipients: Prevalence, clinical relevance and kinetics of viral replication under immunosuppressive therapy.人类偏肺病毒 1 感染肺移植受者:在免疫抑制治疗下病毒复制的流行率、临床相关性和动力学。
J Clin Virol. 2021 Oct;143:104937. doi: 10.1016/j.jcv.2021.104937. Epub 2021 Aug 14.
6
Human pegivirus (HPgV, GBV-C) RNA in volunteer blood donors from a public hemotherapy service in Northern Brazil.巴西北部公共血液治疗服务中的献血者中人类偏肺病毒 (HPgV, GBV-C) RNA。
Virol J. 2020 Oct 14;17(1):153. doi: 10.1186/s12985-020-01427-6.
7
Human pegivirus-1 infection in kidney transplant recipients: A single-center experience.肾移植受者中的人pegivirus-1感染:单中心经验。
J Med Virol. 2020 Dec;92(12):2961-2968. doi: 10.1002/jmv.25764. Epub 2020 Mar 20.
8
Molecular prevalence and genotypes of human pegivirus-1 (HPgV-1) and SENV-like viruses among multiply transfused patients with beta-thalassemia.β地中海贫血多次输血患者中人类pegivirus-1(HPgV-1)和SENV样病毒的分子流行率及基因型
Transfus Apher Sci. 2020 Apr;59(2):102697. doi: 10.1016/j.transci.2019.102697. Epub 2019 Dec 13.
9
Molecular and Clinical Profiles of Human Pegivirus Type 1 Infection in Individuals Living with HIV-1 in the Extreme South of Brazil.巴西极南部地区 HIV-1 感染者中人类嵌杯样病毒 1 型感染的分子和临床特征。
Biomed Res Int. 2019 Jun 11;2019:8048670. doi: 10.1155/2019/8048670. eCollection 2019.
10
Human pegivirus-1 (HPgV-1) RNA prevalence and genotypes in volunteer blood donors from the Brazilian Amazon.巴西亚马逊地区无偿献血者中人类pegivirus-1(HPgV-1)RNA的流行情况及基因型
Transfus Clin Biol. 2019 Nov;26(4):234-239. doi: 10.1016/j.tracli.2019.06.005. Epub 2019 Jun 18.