Tobias I
Department of Chemistry, Rutgers, State University of New Jersey, New Brunswick, NJ 08903.
J Biomol Struct Dyn. 1985 Oct;3(2):315-25. doi: 10.1080/07391102.1985.10508419.
We discuss the predictions which follow from the assumption of statistically independent twist and writhe distributions of given variances in circular DNA with single-strand nicks. The nature of the topoisomer distribution produced upon covalent closure of the nicks is described, as well as the nature of the twist and writhe distributions in the fully-closed molecules. In particular, we show how the distributions depend on the magnitudes of the given variances, and how the relative magnitudes of the variances can be deduced from experiment. One additional consequence of the theory is the prediction of a necessary difference between the temperature coefficient of the twist in nicked versus fully-closed circular DNA. The ratio of the two twist coefficients turns out to depend only on the ratio of the twist and writhe variances in nicked DNA.
我们讨论了从具有单链切口的环状DNA中给定方差的统计独立扭曲和缠绕分布假设得出的预测。描述了切口共价封闭后产生的拓扑异构体分布的性质,以及完全封闭分子中扭曲和缠绕分布的性质。特别是,我们展示了这些分布如何依赖于给定方差的大小,以及如何从实验中推断方差的相对大小。该理论的另一个结果是预测了有切口的与完全封闭的环状DNA中扭曲的温度系数之间的必然差异。结果表明,这两个扭曲系数的比值仅取决于有切口DNA中扭曲和缠绕方差的比值。