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喹啉与氯代硝基苯甲酸盐/共晶体系中的氢键连续统

The Hydrogen-Bond Continuum in the Salt/Cocrystal Systems of Quinoline and Chloro-Nitrobenzoic Acids.

作者信息

Radek Štoček Jakub, Blahut Jan, Chalupná Simona, Čejka Jan, Štěpánová Sille, Kašička Václav, Hušák Michal, Dračínský Martin

机构信息

Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nám. 2, 160 00, Prague 6, Czech Republic.

Department of Organic Chemistry, Faculty of Science, Charles University in Prague, 128 40, Prague 2, Czech Republic.

出版信息

Chemistry. 2024 Dec 5;30(68):e202402946. doi: 10.1002/chem.202402946. Epub 2024 Oct 16.

Abstract

This study investigates the hydrogen-bond geometry in six two-component solid systems composed of quinoline and chloro-nitrobenzoic acids. New X-ray diffraction studies were conducted using both the conventional independent-atom model and the more recent Hirshfeld atom-refinement method, with the latter providing precise hydrogen-atom positions. The systems can be divided into salts (the hydrogen atom transferred to the quinoline nitrogen), cocrystals (the hydrogen atom retained by the acid), and intermediate structures. Solid-state NMR experiments corroborated the X-ray diffraction-derived H-N distances. DFT calculations, using five functionals including hybrid B3LYP and PBE0, showed varying energy profiles for the hydrogen bonds, with notable differences across functionals. These calculations revealed different preferences for salt or cocrystal structures, depending on the functional used. Path-integral molecular dynamics simulations incorporating nuclear quantum effects demonstrated significant hydrogen-atom delocalization, forming a hydrogen-bond continuum, and provided average N-H distances in excellent agreement with experimental results. This comprehensive experimental and theoretical approach highlights the complexity of multicomponent solids. The study emphasizes that the classification into salts or cocrystals is frequently inadequate, as the hydrogen atom is often significantly delocalized in the hydrogen bond. This insight is crucial for understanding and predicting the behavior of such systems in pharmaceutical applications.

摘要

本研究调查了由喹啉和氯代硝基苯甲酸组成的六个二元固体体系中的氢键几何结构。使用传统的独立原子模型和最新的 Hirshfeld 原子精修方法进行了新的 X 射线衍射研究,后者提供了精确的氢原子位置。这些体系可分为盐(氢原子转移到喹啉氮上)、共晶体(氢原子保留在酸上)和中间结构。固态核磁共振实验证实了 X 射线衍射得出的 H-N 距离。使用包括杂化 B3LYP 和 PBE0 在内的五种泛函进行的密度泛函理论计算显示,氢键的能量分布各不相同,不同泛函之间存在显著差异。这些计算揭示了根据所使用的泛函,对盐或共晶体结构有不同的偏好。纳入核量子效应的路径积分分子动力学模拟表明氢原子有显著的离域化,形成了氢键连续体,并提供了与实验结果高度一致的平均 N-H 距离。这种全面的实验和理论方法突出了多组分固体的复杂性。该研究强调,将其分类为盐或共晶体往往是不够的,因为氢原子在氢键中常常有显著的离域化。这一见解对于理解和预测此类体系在药物应用中的行为至关重要。

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