• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

冠状动脉造影术的预训练减影和分割模型。

Pretrained subtraction and segmentation model for coronary angiograms.

机构信息

Department of Cardiology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.

Department of Cardiology, The Affiliated Dazu's Hospital of Chongqing Medical University, Chongqing, 402360, China.

出版信息

Sci Rep. 2024 Aug 27;14(1):19888. doi: 10.1038/s41598-024-71063-5.

DOI:10.1038/s41598-024-71063-5
PMID:39191858
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11349980/
Abstract

This study introduces a novel self-supervised learning method for single-frame subtraction and vessel segmentation in coronary angiography, addressing the scarcity of annotated medical samples in AI applications. We pretrain a U-Net model on a large dataset of unannotated coronary angiograms using an image-to-image translation framework, then fine-tune it on a limited set of manually annotated samples. The pretrained model excels at comprehensive single-frame subtraction, outperforming existing DSA methods. Fine-tuning with just 40 samples yields a Dice coefficient of 0.828 for vessel segmentation. On the public XCAD dataset, our model sets a new state-of-the-art benchmark with a Dice coefficient of 0.755, surpassing both unsupervised and supervised learning approaches. This method achieves robust single-frame subtraction and demonstrates that combining pretraining with minimal fine-tuning enables accurate coronary vessel segmentation with limited manual annotations. We successfully apply this approach to assist physicians in visualizing potential vascular stenosis sites during coronary angiography. Code, dataset, and a live demo will be available available at: https://github.com/newfyu/DeepSA .

摘要

本研究提出了一种新颖的基于自监督学习的冠状动脉造影单帧减影和血管分割方法,解决了人工智能应用中医学样本标注不足的问题。我们使用图像到图像转换框架在大量未标注的冠状动脉造影数据集上对 U-Net 模型进行预训练,然后在有限的手动标注样本上进行微调。该预训练模型在全面的单帧减影方面表现出色,优于现有的 DSA 方法。仅使用 40 个样本进行微调,血管分割的 Dice 系数达到 0.828。在公共 XCAD 数据集上,我们的模型以 0.755 的 Dice 系数创下了新的技术水平,超过了无监督和监督学习方法。该方法实现了稳健的单帧减影,并证明了结合预训练和最小化微调可以在有限的手动标注下实现准确的冠状动脉血管分割。我们成功地将该方法应用于辅助医生在冠状动脉造影中可视化潜在的血管狭窄部位。代码、数据集和实时演示将在:https://github.com/newfyu/DeepSA 上提供。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/ac90143b0d44/41598_2024_71063_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/a62a6b01486c/41598_2024_71063_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/88aeb6758024/41598_2024_71063_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/7b59111e2044/41598_2024_71063_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/815e9229b9b7/41598_2024_71063_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/3997453ec9dc/41598_2024_71063_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/ac90143b0d44/41598_2024_71063_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/a62a6b01486c/41598_2024_71063_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/88aeb6758024/41598_2024_71063_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/7b59111e2044/41598_2024_71063_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/815e9229b9b7/41598_2024_71063_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/3997453ec9dc/41598_2024_71063_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c182/11349980/ac90143b0d44/41598_2024_71063_Fig6_HTML.jpg

相似文献

1
Pretrained subtraction and segmentation model for coronary angiograms.冠状动脉造影术的预训练减影和分割模型。
Sci Rep. 2024 Aug 27;14(1):19888. doi: 10.1038/s41598-024-71063-5.
2
DIAS: A dataset and benchmark for intracranial artery segmentation in DSA sequences.DIAS:DSA 序列中颅内动脉分割的数据集和基准
Med Image Anal. 2024 Oct;97:103247. doi: 10.1016/j.media.2024.103247. Epub 2024 Jun 18.
3
ImageCAS: A large-scale dataset and benchmark for coronary artery segmentation based on computed tomography angiography images.ImageCAS:基于计算机断层血管造影图像的冠状动脉分割的大型数据集和基准。
Comput Med Imaging Graph. 2023 Oct;109:102287. doi: 10.1016/j.compmedimag.2023.102287. Epub 2023 Aug 14.
4
AVDNet: Joint coronary artery and vein segmentation with topological consistency.AVDNet:具有拓扑一致性的冠状动脉和静脉联合分割
Med Image Anal. 2024 Jan;91:102999. doi: 10.1016/j.media.2023.102999. Epub 2023 Oct 14.
5
VESCL: an open source 2D vessel contouring library.VESCL:一个开源的 2D 血管轮廓绘制库。
Int J Comput Assist Radiol Surg. 2024 Aug;19(8):1627-1636. doi: 10.1007/s11548-024-03212-0. Epub 2024 Jun 16.
6
CAVE: Cerebral artery-vein segmentation in digital subtraction angiography.脑动脉-静脉分割在数字减影血管造影中的应用。
Comput Med Imaging Graph. 2024 Jul;115:102392. doi: 10.1016/j.compmedimag.2024.102392. Epub 2024 May 1.
7
Semi-supervised segmentation of coronary DSA using mixed networks and multi-strategies.使用混合网络和多策略的冠状动脉数字减影血管造影半监督分割
Comput Biol Med. 2023 Apr;156:106493. doi: 10.1016/j.compbiomed.2022.106493. Epub 2022 Dec 30.
8
Affinity Feature Strengthening for Accurate, Complete and Robust Vessel Segmentation.增强亲和力特征以实现准确、完整和稳健的血管分割。
IEEE J Biomed Health Inform. 2023 Aug;27(8):4006-4017. doi: 10.1109/JBHI.2023.3274789. Epub 2023 Aug 7.
9
Selective ensemble methods for deep learning segmentation of major vessels in invasive coronary angiography.深度学习选择性集成方法在有创冠状动脉造影中大血管分割中的应用。
Med Phys. 2023 Dec;50(12):7822-7839. doi: 10.1002/mp.16554. Epub 2023 Jun 13.
10
PolypMixNet: Enhancing semi-supervised polyp segmentation with polyp-aware augmentation.PolypMixNet:利用息肉感知增强进行半监督息肉分割。
Comput Biol Med. 2024 Mar;170:108006. doi: 10.1016/j.compbiomed.2024.108006. Epub 2024 Jan 15.

引用本文的文献

1
Self-supervised learning framework application for medical image analysis: a review and summary.基于自监督学习框架的医学图像分析应用:综述与总结。
Biomed Eng Online. 2024 Oct 27;23(1):107. doi: 10.1186/s12938-024-01299-9.

本文引用的文献

1
U-Net-Based Medical Image Segmentation.基于 U-Net 的医学图像分割。
J Healthc Eng. 2022 Apr 15;2022:4189781. doi: 10.1155/2022/4189781. eCollection 2022.
2
Training and validation of a deep learning architecture for the automatic analysis of coronary angiography.深度学习架构的训练和验证用于冠状动脉造影的自动分析。
EuroIntervention. 2021 May 17;17(1):32-40. doi: 10.4244/EIJ-D-20-00570.
3
Lattice-Boltzmann interactive blood flow simulation pipeline.晶格玻尔兹曼交互血流模拟流水线。
Int J Comput Assist Radiol Surg. 2020 Apr;15(4):629-639. doi: 10.1007/s11548-020-02120-3. Epub 2020 Mar 4.
4
Deep learning-based digital subtraction angiography image generation.基于深度学习的数字减影血管造影图像生成。
Int J Comput Assist Radiol Surg. 2019 Oct;14(10):1775-1784. doi: 10.1007/s11548-019-02040-x. Epub 2019 Jul 31.
5
Moving object tracking in clinical scenarios: application to cardiac surgery and cerebral aneurysm clipping.临床场景中的运动目标跟踪:在心脏手术和脑动脉瘤夹闭中的应用。
Int J Comput Assist Radiol Surg. 2019 Dec;14(12):2165-2176. doi: 10.1007/s11548-019-02030-z. Epub 2019 Jul 15.
6
A Robust Probabilistic Model for Motion Layer Separation in X-ray Fluoroscopy.一种用于X射线荧光透视中运动层分离的稳健概率模型。
Inf Process Med Imaging. 2015;24:288-99. doi: 10.1007/978-3-319-19992-4_22.
7
Automatic segmentation of vessels from angiogram sequences using adaptive feature transformation.使用自适应特征变换从血管造影序列中自动分割血管
Comput Biol Med. 2015 Jul;62:239-53. doi: 10.1016/j.compbiomed.2015.04.029. Epub 2015 Apr 25.
8
A new criterion for automatic multilevel thresholding.一种新的自动多级阈值化准则。
IEEE Trans Image Process. 1995;4(3):370-8. doi: 10.1109/83.366472.