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使用该基因靶点对麻风病患者尿液样本中的DNA进行qPCR检测。

qPCR detection of DNA in urine samples of leprosy patients using the gene target.

作者信息

Diana D, Harish M C

机构信息

Molecular Biology and Immunology Division, Schieffelin Institute of Health - Research and Leprosy Centre, Vellore, India.

Department of Biotechnology, Thiruvalluvar University, Vellore, India.

出版信息

Front Mol Biosci. 2024 Aug 13;11:1435679. doi: 10.3389/fmolb.2024.1435679. eCollection 2024.

Abstract

BACKGROUND

Leprosy, a chronic infectious disease caused by , continues to pose a public health challenge in many parts of the world. Early and accurate diagnosis is crucial for effective treatment and prevention of disabilities associated with the disease. Molecular techniques such as PCR have demonstrated great potential as a diagnostic tool for directly detecting DNA in different clinical samples, providing better sensitivity and specificity than conventional diagnostic techniques. The objective of this study was to measure the amount of DNA in leprosy patients' urine samples using the gene target through qPCR.

METHODS

Different clinical samples such as smear, blood, and urine samples were collected from leprosy patients and healthy individuals. Leprosy patients were classified by the Ridley-Jopling classification. The Ziehl-Neelsen staining method was used for the slit skin smear (SSS) samples, and the bacteriological index (BI) was calculated for leprosy patients. DNA extraction and qPCR were performed for all three types of clinical samples using the gene target.

RESULTS

The DNA was successfully detected and quantified in all clinical samples across all types of leprosy among all the study groups using the gene (129 bp) target. The gene target was able to detect the presence of DNA in 100% of urine, 96.1% of blood, and 92.2% of SSS samples of leprosy patients. Urine samples showed significant differences (p < 0.001) between the control and the different clinical forms and between borderline tuberculoid (BT) and pure neuritic leprosy (PNL) cases. There are significant differences in cycle threshold (Ct) values between control cases and clinical categories (p < 0.001), as well as specific differences within clinical categories (p < 0.001), reflecting the variability in bacterial load and detection sensitivity across different sample types and clinical manifestations of leprosy.

CONCLUSION

Overall, this study's findings suggest that the qPCR technique can be used to detect DNA in urine samples of leprosy patients using the gene target. It can also be used for diagnosing the disease and monitoring the effectiveness of anti-leprosy drugs, including multi-drug therapy (MDT), across various leprosy disease groups.

摘要

背景

麻风病是一种由……引起的慢性传染病,在世界许多地区仍然是一项公共卫生挑战。早期准确诊断对于有效治疗和预防与该疾病相关的残疾至关重要。诸如聚合酶链反应(PCR)等分子技术已显示出作为直接检测不同临床样本中……DNA的诊断工具的巨大潜力,比传统诊断技术具有更高的灵敏度和特异性。本研究的目的是通过实时定量聚合酶链反应(qPCR)使用……基因靶点测量麻风病患者尿液样本中的……DNA量。

方法

从麻风病患者和健康个体中收集不同的临床样本,如涂片、血液和尿液样本。麻风病患者按里德利 - 乔普林分类法进行分类。对皮肤涂片(SSS)样本采用萋 - 尼氏染色法,并计算麻风病患者的细菌指数(BI)。对所有三种类型的临床样本使用……基因靶点进行DNA提取和qPCR。

结果

使用……基因(129碱基对)靶点,在所有研究组的所有类型麻风病的所有临床样本中均成功检测并定量了……DNA。该基因靶点能够在100%的麻风病患者尿液样本、96.1%的血液样本和92.2%的皮肤涂片样本中检测到……DNA的存在。尿液样本在对照组与不同临床类型之间以及在界线类偏结核样型(BT)和纯神经炎型麻风(PNL)病例之间显示出显著差异(p < 0.001)。对照组与临床类别之间的循环阈值(Ct)值存在显著差异(p < 0.001),以及临床类别内部也存在特定差异(p < 0.001),这反映了麻风病不同样本类型和临床表现中细菌载量和检测灵敏度的变异性。

结论

总体而言,本研究结果表明,qPCR技术可用于使用……基因靶点检测麻风病患者尿液样本中的……DNA。它还可用于诊断该疾病并监测抗麻风病药物(包括多药联合化疗(MDT))在各种麻风病组中的疗效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8f5/11347395/4fc2281a15fc/fmolb-11-1435679-g001.jpg

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