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从“同一健康”视角看抗菌药物耐药模式

Antimicrobial resistance patterns in in a One Health perspective.

作者信息

Glambek Marte, Skrede Steinar, Sivertsen Audun, Kittang Bård Reiakvam, Kaci Alba, Jonassen Christine Monceyron, Jørgensen Hannah Joan, Oppegaard Oddvar

机构信息

Department of Medicine, Haukeland University Hospital, Bergen, Norway.

Department of Clinical Medicine 2, Department of Clinical Science, University of Bergen, Bergen, Norway.

出版信息

Front Microbiol. 2024 Jun 6;15:1423762. doi: 10.3389/fmicb.2024.1423762. eCollection 2024.

Abstract

BACKGROUND

(SD) is an important pathogen in humans as well as in a broad range of animal species. Escalating rates of antibiotic resistance in SD has been reported in both human and veterinary clinical practice, but the dissemination of resistance determinants has so far never been examined in a One Health Perspective. We wanted to explore the occurrence of zoonotic transmission of SD and the potential for exchange of resistance traits between SD from different host populations.

METHODS

We compared whole genome sequences and phenotypical antimicrobial susceptibility of 407 SD isolates, comprising all isolates obtained from human bloodstream infections in 2018 ( = 274) and available isolates associated with animal infections from the years 2018 and 2019 ( = 133) in Norway.

RESULTS

Antimicrobial resistance genes were detected in 70 (26%), 9 (25%) and 2 (2%) of the isolates derived from humans, companion animals and livestock, respectively. Notably, distinct host associated genotypic resistomes were observed. The (A) gene was the dominant cause of erythromycin resistance in human associated isolates, whereas only (B) and (C) were identified in SD isolates from animals. Moreover, the tetracycline resistance gene (O) was located on different mobile genetic elements in SD from humans and animals. Evidence of niche specialization was also evident in the phylogenetic analysis, as the isolates could be almost perfectly delineated in accordance with host species. Nevertheless, near identical mobile genetic elements were observed in four isolates from different host species including one human, implying potential transmission of antibiotic resistance between different environments.

CONCLUSION

We found a phylogenetic delineation of SD strains in line with host adapted populations and niche specialization. Direct transmission of strains or genetic elements carrying resistance genes between SD from different ecological niches appears to be rare in our geographical region.

摘要

背景

猪链球菌(SD)是人类以及多种动物的重要病原体。在人类和兽医临床实践中,均已报道猪链球菌的抗生素耐药率不断上升,但迄今为止,尚未从“同一健康”视角研究耐药决定因素的传播情况。我们希望探究猪链球菌人畜共患传播的发生情况,以及不同宿主群体的猪链球菌之间耐药性状交换的可能性。

方法

我们比较了407株猪链球菌分离株的全基因组序列和表型抗菌药敏性,这些分离株包括2018年从人类血流感染中获得的所有分离株(n = 274)以及挪威2018年和2019年与动物感染相关的可用分离株(n = 133)。

结果

分别在源自人类、伴侣动物和家畜的分离株中,检测到70株(26%)、9株(25%)和2株(2%)含有抗菌耐药基因。值得注意的是,观察到了与宿主相关的不同基因型耐药组。erm(A)基因是人类相关分离株中红霉素耐药的主要原因,而在动物来源的猪链球菌分离株中仅鉴定出erm(B)和erm(C)。此外,四环素耐药基因tet(O)在人类和动物的猪链球菌中位于不同的移动遗传元件上。在系统发育分析中,生态位特化的证据也很明显,因为分离株几乎可以根据宿主物种完美地划分开来。然而,在包括一名人类在内的来自不同宿主物种的四个分离株中观察到了几乎相同的移动遗传元件,这意味着抗生素耐药性可能在不同环境之间传播。

结论

我们发现猪链球菌菌株在系统发育上与宿主适应群体和生态位特化一致。在我们的地理区域内,不同生态位的猪链球菌之间携带耐药基因的菌株或遗传元件的直接传播似乎很少见。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5807/11348040/6ebdee6a469d/fmicb-15-1423762-g001.jpg

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