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乳腺癌细胞的异质性进化——一项内源性分子-细胞网络研究

Heterogeneous Evolution of Breast Cancer Cells-An Endogenous Molecular-Cellular Network Study.

作者信息

Li Tianqi, Chen Yong-Cong, Ao Ping

机构信息

Center for Quantitative Life Sciences & Physics Department, Shanghai University, Shanghai 200444, China.

School of Biomedical Engineering, Sichuan University, Chengdu 610065, China.

出版信息

Biology (Basel). 2024 Jul 26;13(8):564. doi: 10.3390/biology13080564.

Abstract

Breast cancer heterogeneity presents a significant challenge in clinical therapy, such as over-treatment and drug resistance. These challenges are largely due to its obscure normal epithelial origins, evolutionary stability, and transitions on the cancer subtypes. This study aims to elucidate the cellular emergence and maintenance of heterogeneous breast cancer via quantitative bio-process modeling, with potential benefit to therapeutic strategies for the disease. An endogenous molecular-cellular hypothesis posits that both pathological and physiological states are phenotypes evolved from and shaped by interactions among a number of conserved modules and cellular factors within a biological network. We hereby developed a model of core endogenous network for breast cancer in accordance with the theory, quantifying its intrinsic dynamic properties with dynamic modeling. The model spontaneously generates cell states that align with molecular classifications at both the molecular and modular level, replicating four widely recognized molecular subtypes of the cancer and validating against data extracted from the TCGA database. Further analysis shows that topologically, a singular progression gateway from normal breast cells to cancerous states is identified as the Luminal A-type breast cancer. Activated positive feedback loops are found to stabilize cellular states, while negative feedback loops facilitate state transitions. Overall, more routes are revealed on the cellular transition between stable states, and a traceable count explains the origin of breast cancer heterogeneity. Ultimately, the research intended to strength the search for therapeutic targets.

摘要

乳腺癌的异质性在临床治疗中带来了重大挑战,如过度治疗和耐药性。这些挑战很大程度上归因于其正常上皮起源不明、进化稳定性以及癌症亚型的转变。本研究旨在通过定量生物过程建模阐明异质性乳腺癌的细胞起源和维持机制,这可能对该疾病的治疗策略有益。一种内源性分子 - 细胞假说认为,病理和生理状态都是由生物网络中一些保守模块和细胞因子之间的相互作用进化而来并塑造的表型。我们据此依据该理论开发了一个乳腺癌核心内源性网络模型,用动态建模量化其内在动态特性。该模型自发产生在分子和模块水平上与分子分类一致的细胞状态,复制了该癌症四种广泛认可的分子亚型,并根据从TCGA数据库提取的数据进行了验证。进一步分析表明,在拓扑结构上,从正常乳腺细胞到癌状态的单一进展途径被确定为管腔A型乳腺癌。发现激活的正反馈回路可稳定细胞状态,而负反馈回路则促进状态转变。总体而言,在稳定状态之间的细胞转变上揭示了更多途径,并且一个可追踪的计数解释了乳腺癌异质性的起源。最终,该研究旨在加强对治疗靶点的探索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4d/11352015/3cbc816cfcc5/biology-13-00564-g001.jpg

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