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评估 DNA/RNA 防御 Pro:一种用于增强稳定性、无需提取的 PCR 以及鼻咽拭子样品快速抗原检测的灭活样本采集缓冲液。

Assessment of DNA/RNA Defend Pro: An Inactivating Sample Collection Buffer for Enhanced Stability, Extraction-Free PCR, and Rapid Antigen Testing of Nasopharyngeal Swab Samples.

机构信息

InActiv Blue, Industriepark Oost 2A, 8730 Beernem, Belgium.

Campus Brugge Station, Howest University of Applied Sciences, Rijselstraat 5, 8200 Brugge, Belgium.

出版信息

Int J Mol Sci. 2024 Aug 22;25(16):9097. doi: 10.3390/ijms25169097.

Abstract

This study comprehensively evaluated the DNA/RNA Defend Pro (DRDP) sample collection buffer, designed to inactivate and stabilize patient samples. The primary objectives were to assess DRDP's efficacy in ensuring sample stability, facilitating extraction-free polymerase chain reaction (PCR), and ensuring compatibility with rapid antigen testing (RAT). Ninety-five diagnostic nasopharyngeal swab samples tested for influenza virus (influenza A), respiratory syncytial virus (RSV A), and/or severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) were 10-fold diluted with DRDP and anonymized. Initial characterization and retesting of these samples using cobas Liat confirmed 88 samples as positive, validating the presence of viral targets. Results from rapid antigen testing showed lower sensitivity compared to nucleic acid amplification testing (NAAT) but maintained perfect specificity, with 40 out of 88 positive samples by cobas Liat also testing positive for RAT. Direct RT-qPCR of DRDP-diluted samples demonstrated robust compatibility, with 72 out of 88 samples positive for cobas Liat also testing positive by direct RT-qPCR. Non-concordant results could be explained by the 200-fold lower input of extraction-free NAAT. Stability testing involved incubating 31 positive samples at 4 °C, 20 °C, and 37 °C for 7 days, with extraction-free NAAT. DRDP guaranteed viral RNA stability at all temperatures for influenza A, SARS-CoV-2, and RSV A, showing stability up to 7 days at 4 °C. In conclusion, DRDP is an effective stabilizing medium compatible with direct RT-qPCR and rapid antigen testing and shows great potential for optimizing diagnostic processes, particularly in resource-limited or time-sensitive scenarios.

摘要

本研究全面评估了 DNA/RNA 防御 Pro(DRDP)样本采集缓冲液,旨在使患者样本失活和稳定。主要目标是评估 DRDP 在确保样本稳定性、促进无提取聚合酶链反应(PCR)以及确保与快速抗原检测(RAT)兼容方面的效果。用 DRDP 对 95 份经诊断的鼻咽拭子样本进行了 10 倍稀释,这些样本用于检测流感病毒(流感 A)、呼吸道合胞病毒(RSV A)和/或严重急性呼吸综合征冠状病毒 2(SARS-CoV-2),并对其进行了匿名处理。使用 cobas Liat 对这些样本进行初始特征分析和重新检测,确认 88 份样本为阳性,验证了病毒靶标的存在。快速抗原检测的结果显示出比核酸扩增检测(NAAT)更低的敏感性,但保持了完美的特异性,40 份经 cobas Liat 检测为阳性的样本也通过 RAT 检测呈阳性。DRDP 稀释样本的直接 RT-qPCR 显示出良好的兼容性,72 份经 cobas Liat 检测为阳性的样本也通过直接 RT-qPCR 检测呈阳性。无提取 NAAT 的 200 倍输入量较低,可解释不一致的结果。稳定性测试包括在 4°C、20°C 和 37°C 下孵育 31 份阳性样本 7 天,进行无提取 NAAT。DRDP 保证了流感 A、SARS-CoV-2 和 RSV A 的病毒 RNA 在所有温度下的稳定性,在 4°C 下可稳定 7 天。总之,DRDP 是一种有效的稳定介质,与直接 RT-qPCR 和快速抗原检测兼容,在优化诊断流程方面具有很大的潜力,特别是在资源有限或时间敏感的情况下。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1fb2/11354787/638ab0842e25/ijms-25-09097-g001.jpg

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