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一项关于社区获得性急性肾损伤患者出院4个月后康复者与未完全康复者尿液蛋白质组学差异图谱的初步研究。

A pilot study on the differential urine proteomic profile of subjects with community-acquired acute kidney injury who recover versus those who do not recover completely at 4 months after hospital discharge.

作者信息

Kaur Harpreet, Kamboj Kajal, Naik Sachin, Kumar Vivek, Yadav Ashok Kumar

机构信息

Department of Experimental Medicine & Biotechnology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.

Department of Nephrology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.

出版信息

Front Med (Lausanne). 2024 Aug 19;11:1412561. doi: 10.3389/fmed.2024.1412561.

Abstract

BACKGROUND

Community-acquired acute kidney injury (CA-AKI) is a sudden structural damage and loss of kidney function in otherwise healthy individuals outside of hospital settings having high morbidity and mortality rates worldwide. Long-term sequelae of AKI involve an associated risk of progression to chronic kidney disease (CKD). Serum creatinine (SCr), the currently used clinical parameter for diagnosing AKI, varies greatly with age, gender, diet, and muscle mass. In the present study, we investigated the difference in urinary proteomic profile of subjects that recovered (R) and incompletely recovered (IR) from CA-AKI, 4 months after hospital discharge.

METHODS

Study subjects were recruited from ongoing study of CA-AKI cohort. Patients with either sex or age > 18 years with no underline CKD were enrolled at the time of hospital discharge. Incomplete recovery from CA-AKI was defined as eGFR < 60 mL/min/1.73 m2 or dialysis dependence at 4 months after discharge. Second-morning urine samples were collected, and proteome analysis was performed with LC-MS/MS. Data were analyzed by Proteome Discoverer platform 2.2 (Thermo Scientific) using statistical and various bioinformatics tools for abundance of protein, cellular component, protein class and biological process were analyzed in the recovered and incompletely recovered groups.

RESULTS

A total of 28 subjects (14 in each group) were enrolled. Collectively, 2019 peptides and proteins with 30 high-abundance proteins in the incompletely recovered group (R/IR <0.5, abundance ratio adj. -value <0.05) and 11 high-abundance proteins in the incompletely recovered group (R/IR >2.0, abundance ratio adj. -value <0.05) were identified. Tissue specificity analysis, GO enrichment analysis, and pathway enrichment analysis revealed significant proteins in both the groups that are part of different pathways and might be playing crucial role in renal recovery during the 4-month span after hospital discharge.

CONCLUSION

In conclusion, this study helped in identifying potential proteins and associated pathways that are either upregulated or downregulated at the time of hospital discharge in incompletely recovered CA-AKI patients that can be further investigated to check for their exact role in the disease progression or repair.

摘要

背景

社区获得性急性肾损伤(CA-AKI)是指在非医院环境中原本健康的个体突然出现的肾脏结构损伤和功能丧失,在全球范围内发病率和死亡率都很高。急性肾损伤的长期后遗症包括进展为慢性肾脏病(CKD)的相关风险。血清肌酐(SCr)是目前用于诊断急性肾损伤的临床参数,其值会因年龄、性别、饮食和肌肉量而有很大差异。在本研究中,我们调查了出院4个月后从CA-AKI中恢复(R)和未完全恢复(IR)的受试者的尿蛋白质组学特征差异。

方法

研究对象来自正在进行的CA-AKI队列研究。出院时纳入年龄>18岁、无潜在慢性肾脏病的男女患者。CA-AKI未完全恢复定义为出院4个月时估算肾小球滤过率(eGFR)<60 mL/min/1.73 m2或依赖透析。收集次日晨尿样本,采用液相色谱-串联质谱(LC-MS/MS)进行蛋白质组分析。使用Proteome Discoverer平台2.2(赛默飞世尔科技公司)对数据进行分析,运用统计和各种生物信息学工具对恢复组和未完全恢复组的蛋白质丰度、细胞成分、蛋白质类别和生物学过程进行分析。

结果

共纳入28名受试者(每组14名)。总共鉴定出2019种肽和蛋白质,其中未完全恢复组有30种高丰度蛋白质(R/IR<0.5,丰度比校正P值<0.05),未完全恢复组有11种高丰度蛋白质(R/IR>2.0,丰度比校正P值<0.05)。组织特异性分析、基因本体(GO)富集分析和通路富集分析显示,两组中均有重要蛋白质参与不同通路,可能在出院后4个月的肾脏恢复过程中发挥关键作用。

结论

总之,本研究有助于识别未完全恢复的CA-AKI患者出院时上调或下调产生的潜在蛋白质及相关通路,可进一步研究以确定它们在疾病进展或修复中的确切作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/11370660/436c5a2afd62/fmed-11-1412561-g001.jpg

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