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基于代谢组学对中国商河地区抗炎化合物的分析。

Metabolomics-based profiling of anti-inflammatory compounds from in shanghe, China.

作者信息

Li Wenzhai, Li Peihai, Li Xiaobin, Hou Hairong, Lin Houwen, Jin Meng, Liu Kechun, Zhang Xuanming, Sheng Wenlong

机构信息

Engineering Research Center of Zebrafish Models for Human Diseases and Drug Screening, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, 250103, China.

Research Center for Marine Drugs, State Key Laboratory of Oncogenes and Related Genes, Department of Pharmacy, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China.

出版信息

Heliyon. 2024 Aug 8;10(16):e35974. doi: 10.1016/j.heliyon.2024.e35974. eCollection 2024 Aug 30.

Abstract

is a popular herb used in foods, cosmetics, and medicines. In the present study, liquid chromatography-mass spectrometry-based metabolomics analysis and the zebrafish model were used to investigate the potential biomarkers of growing in Shanghe County (Shandong Province, China) and their anti-inflammatory properties. Network pharmacology and molecular docking were performed to screen the main targets of the characteristic compounds to understand their mechanisms of action. Nine potential markers including sugars (,), polyphenolic acids (-), and flavonoids (-) were identified from the species. The inhibitory effects on leukocyte migration confirmed that compounds and - played a positive role in the protective effect of Shanghe (SM) extract against inflammation. Akt (protein kinase B), EGFR (epidermal growth factor receptor), and MMP9 (matrix metalloproteinase 9) were the core target proteins of the identified compounds in the anti-inflammatory process. The most significant Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment terms were response to abiotic stimulus (Biological Process), carbohydrate derivative binding (Molecular Function), and pathways in cancer. In docking simulations, 3-p-coumaroylquinic acid (3-PC, ) and cirsimaritin (CN, ) exhibited the highest potential affinity to the active sites of Akt and EGFR proteins, respectively; additionally, 5-demethylsinensetin (5-DS, ) and luteolin (LN, ) were considered the most suitable ligands for the MMP9 protein. The present study highlighted the use of SM resources as functional products with health benefits.

摘要

是一种在食品、化妆品和药品中常用的草药。在本研究中,基于液相色谱-质谱联用的代谢组学分析和斑马鱼模型被用于研究在中国山东省商河县生长的[草药名称未给出]的潜在生物标志物及其抗炎特性。进行了网络药理学和分子对接以筛选特征化合物的主要靶点,以了解其作用机制。从该物种中鉴定出9种潜在标志物,包括糖类([具体糖类未给出])、多酚酸([具体多酚酸未给出])和黄酮类化合物([具体黄酮类化合物未给出])。对白细胞迁移的抑制作用证实化合物[化合物编号未给出]和[化合物编号未给出]在商河[草药名称未给出](SM)提取物的抗炎保护作用中发挥了积极作用。Akt(蛋白激酶B)、EGFR(表皮生长因子受体)和MMP9(基质金属蛋白酶9)是所鉴定化合物在抗炎过程中的核心靶蛋白。最显著的基因本体论和京都基因与基因组百科全书富集术语是对非生物刺激的反应(生物过程)、碳水化合物衍生物结合(分子功能)和癌症通路。在对接模拟中,3-对香豆酰奎尼酸(3-PC,[具体结构未给出])和 cirsimaritin(CN,[具体结构未给出])分别对Akt和EGFR蛋白的活性位点表现出最高的潜在亲和力;此外,5-去甲基橙皮素(5-DS,[具体结构未给出])和木犀草素(LN,[具体结构未给出])被认为是MMP9蛋白最合适的配体。本研究强调了将SM资源用作具有健康益处的功能性产品。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e7a/11365440/67e4cc10d5a6/ga1.jpg

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