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细菌 γ-碳酸酐酶。

Bacterial γ-carbonic anhydrases.

机构信息

Neurofarba Department, University of Florence, Sesto Fiorentino, Florence, Italy.

出版信息

Enzymes. 2024;55:93-120. doi: 10.1016/bs.enz.2024.05.002. Epub 2024 Aug 23.

DOI:10.1016/bs.enz.2024.05.002
PMID:39223000
Abstract

Carbonic anhydrases (CAs) are a ubiquitous family of zinc metalloenzymes that catalyze the reversible hydration of carbon dioxide to bicarbonate and protons, playing pivotal roles in a variety of biological processes including respiration, calcification, acid-base balance, and CO fixation. Recent studies have expanded the understanding of CAs, particularly the γ-class from diverse biological sources such as pathogenic bacteria, extremophiles, and halophiles, revealing their unique structural adaptations and functional mechanisms that enable operation under extreme environmental conditions. This chapter discusses the comprehensive catalytic mechanism and structural insights from X-ray crystallography studies, highlighting the molecular adaptations that confer stability and activity to these enzymes in harsh environments. It also explores the modulation mechanism of these enzymes, detailing how different modulators interact with the active site of γ-CAs. Comparative analyzes with other CA classes elucidate the evolutionary trajectories and functional diversifications of these enzymes. The synthesis of this knowledge not only sheds light on the fundamental aspects of CA biology but also opens new avenues for therapeutic and industrial applications, particularly in designing targeted inhibitors for pathogenic bacteria and developing biocatalysts for industrial processes under extreme conditions. The continuous advancement in structural biology promises further insights into this enzyme family, potentially leading to novel applications in medical and environmental biotechnology.

摘要

碳酸酐酶(CA)是一类广泛存在的锌金属酶,能够催化二氧化碳的可逆水合作用,生成碳酸氢根和质子。它们在多种生物学过程中发挥着关键作用,包括呼吸作用、钙化作用、酸碱平衡和 CO2 固定等。最近的研究扩展了对 CA 的认识,特别是来自不同生物来源的 γ 类 CA,如致病细菌、极端微生物和嗜盐微生物。这些研究揭示了它们在极端环境条件下独特的结构适应性和功能机制。本章讨论了来自 X 射线晶体学研究的全面催化机制和结构见解,强调了这些酶在恶劣环境中赋予稳定性和活性的分子适应性。还探讨了这些酶的调节机制,详细介绍了不同调节剂如何与 γ-CA 的活性位点相互作用。与其他 CA 类别的比较分析阐明了这些酶的进化轨迹和功能多样化。综合这些知识不仅揭示了 CA 生物学的基本方面,还为治疗和工业应用开辟了新途径,特别是在设计针对致病细菌的靶向抑制剂和开发极端条件下工业过程的生物催化剂方面。结构生物学的不断进步有望进一步深入了解这个酶家族,可能为医学和环境生物技术带来新的应用。

相似文献

1
Bacterial γ-carbonic anhydrases.细菌 γ-碳酸酐酶。
Enzymes. 2024;55:93-120. doi: 10.1016/bs.enz.2024.05.002. Epub 2024 Aug 23.
2
Catalytic mechanism of α-class carbonic anhydrases: CO2 hydration and proton transfer.α类碳酸酐酶的催化机制:二氧化碳水合作用与质子转移
Subcell Biochem. 2014;75:31-52. doi: 10.1007/978-94-007-7359-2_3.
3
Prokaryotic carbonic anhydrases.原核碳酸酐酶。
FEMS Microbiol Rev. 2000 Oct;24(4):335-66. doi: 10.1111/j.1574-6976.2000.tb00546.x.
4
An overview of the alpha-, beta- and gamma-carbonic anhydrases from Bacteria: can bacterial carbonic anhydrases shed new light on evolution of bacteria?细菌中α-、β-和γ-碳酸酐酶概述:细菌碳酸酐酶能否为细菌的进化带来新的启示?
J Enzyme Inhib Med Chem. 2015 Apr;30(2):325-32. doi: 10.3109/14756366.2014.910202. Epub 2014 Apr 25.
5
Overview on bacterial carbonic anhydrase genetic families.细菌碳酸酐酶基因家族概述。
Enzymes. 2024;55:1-29. doi: 10.1016/bs.enz.2024.05.004. Epub 2024 Jun 1.
6
In Silico Investigation of Potential Applications of Gamma Carbonic Anhydrases as Catalysts of CO Biomineralization Processes: A Visit to the Thermophilic Bacteria and .计算机模拟研究γ碳酸酐酶作为 CO 生物矿化过程催化剂的潜在应用:对嗜热细菌的访问 和 。
Int J Mol Sci. 2021 Mar 11;22(6):2861. doi: 10.3390/ijms22062861.
7
Thermal-stable carbonic anhydrases: a structural overview.热稳定碳酸酐酶:结构概述
Subcell Biochem. 2014;75:387-404. doi: 10.1007/978-94-007-7359-2_19.
8
Bacterial β-carbonic anhydrases.细菌β-碳酸酐酶。
Enzymes. 2024;55:65-91. doi: 10.1016/bs.enz.2024.05.009. Epub 2024 Aug 16.
9
Thermostable Carbonic Anhydrases in Biotechnological Applications.生物技术应用中的热稳定碳酸酐酶
Int J Mol Sci. 2015 Jul 8;16(7):15456-80. doi: 10.3390/ijms160715456.
10
Neutron crystallographic studies of carbonic anhydrase.碳酸酐酶的中子晶体学研究。
Methods Enzymol. 2020;634:281-309. doi: 10.1016/bs.mie.2020.01.003. Epub 2020 Feb 10.

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