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验证一种直接多重实时逆转录聚合酶链反应检测方法,用于快速检测越南猪场内的非洲猪瘟病毒。

Validation of a direct multiplex real-time reverse transcription PCR assay for rapid detection of African swine fever virus using swine field samples in Vietnam.

机构信息

Division of Transboundary Animal Disease Research, National Institute of Animal Health, National Agriculture and Food Research Organization, 6-20-1, Josui-honcho, Kodaira, Tokyo, 187-0022, Japan.

Department of Biochemistry and Immunology, National Institute of Veterinary Research, 86, Truong Chinh, Dong Da, Hanoi, Vietnam.

出版信息

BMC Res Notes. 2024 Sep 2;17(1):240. doi: 10.1186/s13104-024-06898-2.

Abstract

OBJECTIVE

This study validates a direct multiplex real-time reverse transcription polymerase chain reaction (rRT-PCR) assay which was previously established for enabling rapid and simultaneous detection of African swine fever (ASF) virus (ASFV) and classical swine fever virus. The assay eliminates the need for viral nucleic acid purification using a buffer system for crude extraction and an impurity-tolerant enzyme. However, the assay had not yet been validated using field samples of ASFV-infected pigs. Therefore, to address this gap, we tested 101 samples collected from pigs in Vietnam during 2018 and 2021 for validation.

RESULTS

The rRT-PCR assay demonstrated a diagnostic sensitivity of 98.8% and a specificity of 100%. Remarkably, crude samples yielded results comparable to those of purified samples, indicating the feasibility of using crude samples without compromising accuracy in ASFV detection. Our findings emphasize the effectiveness of the rRT-PCR assay for the prompt and accurate diagnosis of both swine fever viruses, which is essential for effective disease prevention and control in swine populations.

摘要

目的

本研究验证了一种先前建立的用于快速同时检测非洲猪瘟病毒(ASFV)和经典猪瘟病毒的直接多重实时逆转录聚合酶链反应(rRT-PCR)检测方法。该方法通过使用缓冲液系统进行粗提取和耐杂质酶,消除了病毒核酸纯化的需要。然而,该方法尚未使用感染 ASFV 的猪的现场样本进行验证。因此,为了解决这一空白,我们测试了 2018 年至 2021 年期间从越南猪群中采集的 101 个样本进行验证。

结果

rRT-PCR 检测方法的诊断灵敏度为 98.8%,特异性为 100%。值得注意的是,粗提样品的结果与纯化样品相当,表明在不影响 ASFV 检测准确性的情况下使用粗提样品是可行的。我们的研究结果强调了 rRT-PCR 检测方法在快速准确诊断猪瘟病毒方面的有效性,这对于猪群中有效预防和控制疾病至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d334/11370023/7fbefde45935/13104_2024_6898_Fig1_HTML.jpg

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