Department of Translational Medical Sciences, Pediatric Section, Federico II University of Naples, Naples, Italy.
Istituto per le Applicazioni del Calcolo "Mauro Picone", Naples, Italy.
Front Immunol. 2024 Aug 19;15:1444130. doi: 10.3389/fimmu.2024.1444130. eCollection 2024.
Ataxia telangiectasia (AT) is a rare disorder characterized by neurodegeneration, combined immunodeficiency, a predisposition to malignancies, and high clinical variability. Profiling of microRNAs (miRNAs) may offer insights into the underlying mechanisms of complex rare human diseases, as miRNAs play a role in various biological functions including proliferation, differentiation, and DNA repair. In this study, we investigate the differential expression of miRNAs in samples from AT patients to identify miRNA patterns and analyze how these patterns are related to the disease.
We enrolled 20 AT patients (mean age 17.7 ± 9.6 years old) and collected clinical and genetic data. We performed short non-coding RNA-seq analysis on peripheral blood mononuclear cells (PBMCs) and fibroblasts to compare the miRNA expression profile between AT patients and controls.
We observed 42 differentially expressed (DE)-miRNAs in blood samples and 26 in fibroblast samples. Among these, three DE-miRNAs, miR-342-3p, miR-30a-5p, and miR-195-5p, were further validated in additional AT samples, confirming their dysregulation.
We identified an AT-related miRNA signature in blood cells and fibroblast samples collected from a group of AT patients. We also predicted several dysregulated pathways, primarily related to cancer, immune system control, or inflammatory processes. The findings suggest that miRNAs may provide insights into the pathophysiology and tumorigenesis of AT and have the potential to serve as useful biomarkers in cancer research.
毛细血管扩张共济失调症(AT)是一种罕见的疾病,其特征为神经退行性变、联合免疫缺陷、恶性肿瘤易感性以及高度临床变异性。微 RNA(miRNA)谱分析可能有助于深入了解复杂的罕见人类疾病的潜在机制,因为 miRNA 在各种生物学功能中发挥作用,包括增殖、分化和 DNA 修复。在这项研究中,我们研究了 AT 患者样本中 miRNA 的差异表达,以确定 miRNA 模式,并分析这些模式与疾病的关系。
我们招募了 20 名 AT 患者(平均年龄 17.7 ± 9.6 岁),并收集了临床和遗传数据。我们对外周血单核细胞(PBMCs)和成纤维细胞进行短非编码 RNA-seq 分析,以比较 AT 患者和对照组之间的 miRNA 表达谱。
我们观察到血液样本中有 42 个差异表达(DE)-miRNA,而在成纤维细胞样本中有 26 个。其中,三个 DE-miRNA,miR-342-3p、miR-30a-5p 和 miR-195-5p,在另外的 AT 样本中得到进一步验证,证实其失调。
我们在一组 AT 患者的血液细胞和成纤维细胞样本中鉴定出与 AT 相关的 miRNA 特征。我们还预测了几个失调的途径,主要与癌症、免疫系统控制或炎症过程有关。这些发现表明,miRNA 可能为 AT 的病理生理学和肿瘤发生提供见解,并有可能成为癌症研究中的有用生物标志物。