Meyer Mark B, Lee Seong Min, Towne Jordan M, Cichanski Shannon R, Kaufmann Martin, Jones Glenville, Pike J Wesley
Department of Nutritional Sciences, University of Wisconsin-Madison, Madison, WI 53706, U.S.A.
Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario, Canada K7L3N6.
bioRxiv. 2024 Aug 24:2024.08.23.609393. doi: 10.1101/2024.08.23.609393.
CYP24A1 is a multifunctional, P450 mitochondrial 24-hydroxylase enzyme that is responsible for catabolism of the most active vitamin D hormone (calcitriol, 1,25(OH)D), its precursor (calcifediol, 25(OH)D), and numerous other vitamin D metabolites at the 23- and 24-carbon positions. In the kidney, is induced by 1,25(OH)D, induced by FGF23, and potently suppressed by PTH to tightly control the circulating blood levels of 1,25(OH)D. This gene is believed to be under the control of a pair of classic promoter proximal (PRO) vitamin D response elements (VDREs) that are aided by distal, downstream (DS) containing enhancers that we identified more recently. The DS1 enhancer cluster was found to respond to PTH and FGF23 actions in a kidney-specific manner. The DS2 enhancer cluster was found to assist in the response of 1,25(OH)D in kidney, as well as other target tissues. Despite this knowledge, the contribution of the PRO VDREs to gene expression, what drives basal expression in the kidney, how FGF23 activates , and importantly, how PTH suppresses , all remain unknown. Here in this study, we utilize homology directed CRISPR to mutate one or both VDREs in the PRO region of the gene in the mouse to address these questions. We found that the VDRE (VDRE1) more proximal to the to the transcriptional start site (TSS) is the dominant VDRE of the pair and mutation of both VDREs leads to a dramatic loss of VDR, a reduction of gene expression in the kidney, and a near elimination of 1,25(OH)D induction in the intestine. FGF23 induction of was reduced with mutation of the PRO VDREs, however, co-treatment of 1,25(OH)D and FGF23 synergistically increased expression even with the loss of the PRO VDREs. PTH suppression of gene expression was unchanged with PRO VDRE mutations, despite a minor reduction in total pCREB occupancy. Finally, VDR occupancy was dramatically reduced across the DS enhancers in the locus after the PRO VDREs mutation. Taken together, our data suggest a cooperative relationship between the DS and PRO enhancers in the regulation of by 1,25(OH)D and FGF23, and despite the overall reduction of CREB on the genome it appeared that suppression either does not rely on CREB or that the PRO VDREs are unconnected to PTH suppression altogether. These studies point to the DS1 region as a basal switch for expression and help further define the interconnected genomic control of these hormones on vitamin D catabolism.
CYP24A1是一种多功能的细胞色素P450线粒体24-羟化酶,负责最具活性的维生素D激素(骨化三醇,1,25(OH)D)、其前体(骨化二醇,25(OH)D)以及许多其他维生素D代谢产物在23和24碳位置的分解代谢。在肾脏中,它由1,25(OH)D诱导,由成纤维细胞生长因子23(FGF23)诱导,并被甲状旁腺激素(PTH)强烈抑制,以严格控制循环血液中1,25(OH)D的水平。该基因被认为受一对经典的启动子近端(PRO)维生素D反应元件(VDREs)控制,这些元件由我们最近发现的包含远端下游(DS)增强子辅助。发现DS1增强子簇以肾脏特异性方式对PTH和FGF23的作用作出反应。发现DS2增强子簇有助于肾脏以及其他靶组织中1,25(OH)D的反应。尽管有这些认识,但PRO VDREs对基因表达的贡献、驱动肾脏中基础表达的因素、FGF23如何激活该基因以及重要的是PTH如何抑制该基因,仍然未知。在本研究中,我们利用同源定向CRISPR技术在小鼠中突变该基因PRO区域中的一个或两个VDREs,以解决这些问题。我们发现,更靠近转录起始位点(TSS)的VDRE(VDRE1)是这对VDRE中的主导VDRE,两个VDRE的突变导致维生素D受体(VDR)显著丧失、肾脏中该基因表达降低以及肠道中1,25(OH)D诱导几乎消除。PRO VDREs突变后,FGF23对该基因的诱导作用降低,然而,即使PRO VDREs缺失,1,25(OH)D和FGF23的联合处理仍能协同增加该基因的表达。尽管总磷酸化CREB占有率略有降低,但PRO VDREs突变后,PTH对该基因表达的抑制作用未改变。最后,PRO VDREs突变后,该基因座中DS增强子上的VDR占有率显著降低。综上所述,我们的数据表明DS和PRO增强子在1,25(OH)D和FGF23对该基因的调控中存在协同关系,尽管基因组上CREB总体减少,但似乎抑制作用要么不依赖于CREB,要么PRO VDREs与PTH抑制作用完全无关。这些研究指出DS1区域是该基因表达的基础开关,并有助于进一步确定这些激素对维生素D分解代谢的相互关联的基因组控制。