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库尼茨型胰蛋白酶抑制剂的晶体结构:天然及包封蛋白靶向赫氏肠道胰蛋白酶的昆虫毒性效应

Crystal structure of Kunitz-type trypsin inhibitor: Entomotoxic effect of native and encapsulated protein targeting gut trypsin of Herbst.

作者信息

Mehmood Sohaib, Thirup Soren Skou, Ahmed Sarah, Bashir Nabila, Saeed Ahsan, Rafiq Maria, Saeed Qamar, Najam-Ul-Haq Muhammad, Khaliq Binish, Ibrahim Muhammad, Alonazi Wadi Brak, Akrem Ahmed

机构信息

Institute of Botany, Bahauddin Zakariya University, Multan 60800, Pakistan.

Department of Molecular Biology and Genetics, Centre for Structural Biology, Aarhus University, Aarhus 8000, Denmark.

出版信息

Comput Struct Biotechnol J. 2024 Aug 3;23:3132-3142. doi: 10.1016/j.csbj.2024.07.023. eCollection 2024 Dec.

Abstract

Trypsin inhibitors are known to act against insect pests by inhibiting proteases of the digestive tract. In this study, we report structural and functional characterization of ∼ 19 kDa Kunitz-type trypsin inhibitor (ApKTI) protein with potential bio-insecticidal applications. Crystal structure of ApKTI protein has been refined to 1.42 Å and molecular structure (8HNR) showed highly beta sheeted conformation including 12 beta sheets, 15 loops and two small alpha helices. Docking between predicted model of trypsin (TcPT) and 8HNR produced a stable complex (-11.3 kcal/mol) which reflects the inhibitory potential of ApKTI against insect gut trypsin. Significant mortality was observed in all life stages of including egg, larvae, pupae and adults with a 3.0 mg native ApKTI treatment in comparison to negative control. Although standard trypsin inhibitor ( trypsin inhibitors; GmKTI; 3.0 mg) produced maximum reduction against all above life stages; however, a non-significant mortality difference was observed in comparison to 3.0 mg native ApKTI. The study further explores the synthesis and characterization of Graphene (GNPs) and Zinc oxide (ZnONPs) nanoparticles, followed by the optimization of ApKTI and GmKTI loading on both nanoparticles to evaluate their enhanced insecticidal effectiveness. Encapsulated proteins showed significant mortality against across all concentrations, with GNPs proving more effective than ZnONPs. Additionally, encapsulated GmKTI produced significant mortality of eggs compared to loaded ApKTI treatments while other life stages were non-significantly affected by two proteins. This research highlights the importance of encapsulated ApKTI protein for eco-friendly pest management strategies.

摘要

已知胰蛋白酶抑制剂通过抑制消化道蛋白酶来对抗害虫。在本研究中,我们报告了具有潜在生物杀虫应用的约19 kDa库尼茨型胰蛋白酶抑制剂(ApKTI)蛋白的结构和功能特征。ApKTI蛋白的晶体结构已精修至1.42 Å,分子结构(8HNR)显示出高度β折叠构象,包括12个β折叠、15个环和两个小α螺旋。胰蛋白酶(TcPT)预测模型与8HNR之间的对接产生了一个稳定的复合物(-11.3 kcal/mol),这反映了ApKTI对昆虫肠道胰蛋白酶的抑制潜力。与阴性对照相比,用3.0 mg天然ApKTI处理时,在包括卵、幼虫、蛹和成虫在内的所有生命阶段均观察到显著死亡率。尽管标准胰蛋白酶抑制剂(胰蛋白酶抑制剂;GmKTI;3.0 mg)对上述所有生命阶段的死亡率降低最大;然而,与3.0 mg天然ApKTI相比,观察到的死亡率差异不显著。该研究进一步探索了石墨烯(GNPs)和氧化锌(ZnONPs)纳米颗粒的合成与表征,随后优化了两种纳米颗粒上ApKTI和GmKTI的负载量,以评估它们增强的杀虫效果。包封的蛋白质在所有浓度下对均表现出显著死亡率,结果表明GNPs比ZnONPs更有效。此外,与负载ApKTI处理相比,包封的GmKTI对卵产生了显著死亡率,而其他生命阶段受两种蛋白质的影响不显著。本研究强调了包封的ApKTI蛋白在生态友好型害虫管理策略中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/334e/11369452/7648e29e7090/ga1.jpg

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