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基于基质免疫特征预测宫颈癌预后的分子亚型与列线图

Molecular subtypes and nomogram for predicting the prognosis of cervical cancer based on a matrix-immune signature.

作者信息

Liao Yuanyuan, Huang Qidan, Shen Guqun, Muhanmode Yalikun, Luo Xiaolin, Li Fen, Wen Mengke, Liu Jihong, Huang He

机构信息

Department of Gynecological Oncology, Sun Yat-sen University Cancer Center, Guangzhou, 510000, China.

The Second Department of Gynecology, Affiliated Tumor Hospital of Xinjiang Medical University, Urumqi, 830011, China.

出版信息

Discov Oncol. 2024 Sep 4;15(1):405. doi: 10.1007/s12672-024-01265-w.

DOI:10.1007/s12672-024-01265-w
PMID:39230769
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11374942/
Abstract

Cervical cancer is a kind of tumor related to chronic HPV infection. Currently, the treatment of cervical cancer is guided mainly by clinicopathological factors. The role of tumor microenvironment in the prognosis and treatment of cervical cancer has been ignored. We aimed to use bioinformatics to identify the molecular subtypes in cervical cancer and construct a predictive nomogram combining a matrix-immune signature (MIS) and clinicopathological factors to support treatment decisions. Two cervical cancer subtypes with different prognoses were identified based on matrix- and immune-genes in TCGA-CESC. The MIS was developed using Cox regression and Lasso algorithm and verified in the Cancer Genome Characterization Initiative (CGCI) using time-dependent receiver operating characteristic (ROC) curve analysis. Multivariable analysis identified lymph node metastases, lymphovascular space invasion, and the MIS as independent prognostic factors, which were used to construct the predictive nomogram. The areas under the ROC curve of the model were 0.872, 0.879, and 0.803 for the 1-, 3-, and 5-year periods, respectively. The C-index was 0.845. Calibration curves confirmed the excellent prognosis prediction of the nomogram. The nomogram indicted a 3-year survival rate of > 90% in patients with a total score > 110.1. The constructed predictive nomogram has significant implications for prognostic assessment and treatment selection in cervical cancer.

摘要

宫颈癌是一种与慢性人乳头瘤病毒(HPV)感染相关的肿瘤。目前,宫颈癌的治疗主要以临床病理因素为指导。肿瘤微环境在宫颈癌预后和治疗中的作用一直被忽视。我们旨在利用生物信息学确定宫颈癌的分子亚型,并构建一个结合基质免疫特征(MIS)和临床病理因素的预测列线图,以支持治疗决策。基于TCGA-CESC中的基质基因和免疫基因,确定了两种预后不同的宫颈癌亚型。使用Cox回归和Lasso算法开发了MIS,并在癌症基因组特征计划(CGCI)中使用时间依赖性受试者工作特征(ROC)曲线分析进行了验证。多变量分析确定淋巴结转移、淋巴管间隙浸润和MIS为独立预后因素,这些因素被用于构建预测列线图。该模型在1年、3年和5年时的ROC曲线下面积分别为0.872、0.879和0.803。C指数为0.845。校准曲线证实了列线图对预后的良好预测。列线图显示,总分>110.1的患者3年生存率>90%。构建的预测列线图对宫颈癌的预后评估和治疗选择具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/6f4efe518256/12672_2024_1265_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/4c79adb7be17/12672_2024_1265_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/7287fe68cf54/12672_2024_1265_Fig3_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/205f974649ce/12672_2024_1265_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/549c763bf060/12672_2024_1265_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/b508e9dda0d9/12672_2024_1265_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/86dda719ae65/12672_2024_1265_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/6f4efe518256/12672_2024_1265_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/4c79adb7be17/12672_2024_1265_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/4a991170b5c8/12672_2024_1265_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/7287fe68cf54/12672_2024_1265_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/34b0fd7d41cf/12672_2024_1265_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/205f974649ce/12672_2024_1265_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/549c763bf060/12672_2024_1265_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/b508e9dda0d9/12672_2024_1265_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/86dda719ae65/12672_2024_1265_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7faa/11374942/6f4efe518256/12672_2024_1265_Fig9_HTML.jpg

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本文引用的文献

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Cancer Cell Membrane-Enveloped Dexamethasone Normalizes the Tumor Microenvironment and Enhances Gynecologic Cancer Chemotherapy.癌症细胞膜包裹的地塞米松使肿瘤微环境正常化并增强妇科癌症化疗。
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