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贝叶斯因子的良好检验。

A Good check on the Bayes factor.

机构信息

Department of Psychology, University of Amsterdam, Amsterdam, Netherlands.

出版信息

Behav Res Methods. 2024 Dec;56(8):8552-8566. doi: 10.3758/s13428-024-02491-4. Epub 2024 Sep 4.

DOI:10.3758/s13428-024-02491-4
PMID:39231912
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11525426/
Abstract

Bayes factor hypothesis testing provides a powerful framework for assessing the evidence in favor of competing hypotheses. To obtain Bayes factors, statisticians often require advanced, non-standard tools, making it important to confirm that the methodology is computationally sound. This paper seeks to validate Bayes factor calculations by applying two theorems attributed to Alan Turing and Jack Good. The procedure entails simulating data sets under two hypotheses, calculating Bayes factors, and assessing whether their expected values align with theoretical expectations. We illustrate this method with an ANOVA example and a network psychometrics application, demonstrating its efficacy in detecting calculation errors and confirming the computational correctness of the Bayes factor results. This structured validation approach aims to provide researchers with a tool to enhance the credibility of Bayes factor hypothesis testing, fostering more robust and trustworthy scientific inferences.

摘要

贝叶斯因子假设检验为评估竞争假设的证据提供了一个强大的框架。为了获得贝叶斯因子,统计学家通常需要先进的、非标准的工具,因此确认该方法在计算上是合理的非常重要。本文旨在通过应用艾伦·图灵和杰克·古德的两个定理来验证贝叶斯因子的计算。该程序包括在两个假设下模拟数据集,计算贝叶斯因子,并评估它们的期望值是否与理论期望一致。我们通过一个方差分析示例和一个网络心理计量学应用来说明这种方法,证明了它在检测计算错误和确认贝叶斯因子结果的计算正确性方面的有效性。这种结构化的验证方法旨在为研究人员提供一种工具,以提高贝叶斯因子假设检验的可信度,促进更稳健和可靠的科学推断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/41119036ecd1/13428_2024_2491_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/cf556a16b41e/13428_2024_2491_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/35db4fcc9b4c/13428_2024_2491_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/b24e3a126d70/13428_2024_2491_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/6cdc14d10ca0/13428_2024_2491_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/8bd819ff059d/13428_2024_2491_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/41119036ecd1/13428_2024_2491_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/cf556a16b41e/13428_2024_2491_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/35db4fcc9b4c/13428_2024_2491_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/b24e3a126d70/13428_2024_2491_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/6cdc14d10ca0/13428_2024_2491_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/8bd819ff059d/13428_2024_2491_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f066/11525426/41119036ecd1/13428_2024_2491_Fig6_HTML.jpg

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本文引用的文献

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Testing Conditional Independence in Psychometric Networks: An Analysis of Three Bayesian Methods.测试心理计量网络中的条件独立性:三种贝叶斯方法分析。
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2
Guest Editors' Introduction to The Special Issue "Network Psychometrics in Action": Methodological Innovations Inspired by Empirical Problems.客座编辑对“网络心理测量学的实际应用”特刊的介绍:受实证问题启发的方法创新
Psychometrika. 2022 Mar;87(1):1-11. doi: 10.1007/s11336-022-09861-x. Epub 2022 Apr 9.
3
A review of applications of the Bayes factor in psychological research.
贝叶斯因子在心理学研究中的应用综述。
Psychol Methods. 2023 Jun;28(3):558-579. doi: 10.1037/met0000454. Epub 2022 Mar 17.
4
Workflow techniques for the robust use of bayes factors.贝叶斯因子稳健应用的工作流技术。
Psychol Methods. 2023 Dec;28(6):1404-1426. doi: 10.1037/met0000472. Epub 2022 Mar 10.
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Objective Bayesian Edge Screening and Structure Selection for Ising Networks.基于贝叶斯边缘筛选和结构选择的伊辛网络。
Psychometrika. 2022 Mar;87(1):47-82. doi: 10.1007/s11336-022-09848-8. Epub 2022 Feb 22.
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Bayesian Estimation for Gaussian Graphical Models: Structure Learning, Predictability, and Network Comparisons.贝叶斯估计在高斯图模型中的应用:结构学习、可预测性以及网络比较。
Multivariate Behav Res. 2021 Mar-Apr;56(2):336-352. doi: 10.1080/00273171.2021.1894412. Epub 2021 Mar 19.
7
The JASP guidelines for conducting and reporting a Bayesian analysis.JASP 进行和报告贝叶斯分析的指南。
Psychon Bull Rev. 2021 Jun;28(3):813-826. doi: 10.3758/s13423-020-01798-5.
8
Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling.使用 Warp-III 桥采样计算证据积累模型的贝叶斯因子。
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