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来自……的GH29 α-L-葡萄糖苷酶的底物特异性

Substrate Specificity of GH29 α-L-Glucosidases from .

作者信息

Kang Hye-Jin, Tagami Takayoshi, Okuyama Masayuki

机构信息

1 Research Faculty of Agriculture, Hokkaido University.

出版信息

J Appl Glycosci (1999). 2024 Aug 20;71(3):91-94. doi: 10.5458/jag.jag.JAG-2024_0004. eCollection 2024.

DOI:10.5458/jag.jag.JAG-2024_0004
PMID:39234032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11368710/
Abstract

We recently found two α-L-glucosidases, which can hydrolyze -nitrophenyl α-L-glucopyranoside (PNP L-Glc) rather than -nitrophenyl α-L-fucopyranoside, in glycoside hydrolase family 29. This study evaluated their substrate specificity for -nitrophenyl α-L-rhamnopyranoside (PNP L-Rha), α-L-quinovopyranoside (PNP L-Qui), and α-L-xylopyranoside (PNP L-Xyl), of which structure is similar to PNP L-Glc. The two α-L-glucosidases had little activity toward PNP L-Rha. They exhibited higher / values for PNP L-Qui but smaller for PNP L-Xyl than for PNP L-Glc. The molecular docking studies indicated that these specificities were correlated well with the active-site structure of the α-L-glucosidases. The finding that α-L-quinovoside, which has been suggested to occur in nature, is also a substrate for α-L-glucosidases indicates that this enzyme are not solely dedicated to α-L-glucoside hydrolysis.

摘要

我们最近在糖苷水解酶家族29中发现了两种α-L-葡萄糖苷酶,它们能够水解对硝基苯基α-L-吡喃葡萄糖苷(PNP L-Glc),而不是对硝基苯基α-L-吡喃岩藻糖苷。本研究评估了它们对结构与PNP L-Glc相似的对硝基苯基α-L-吡喃鼠李糖苷(PNP L-Rha)、α-L-奎诺吡喃糖苷(PNP L-Qui)和α-L-吡喃木糖苷(PNP L-Xyl)的底物特异性。这两种α-L-葡萄糖苷酶对PNP L-Rha几乎没有活性。它们对PNP L-Qui的催化效率/值较高,但对PNP L-Xyl的催化效率/值比对PNP L-Glc的小。分子对接研究表明,这些特异性与α-L-葡萄糖苷酶的活性位点结构密切相关。有研究表明自然界中存在α-L-奎诺糖苷,它也是α-L-葡萄糖苷酶的底物,这一发现表明该酶并非仅专一作用于α-L-糖苷水解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb21/11368710/b5ad204d40c2/JAG-71-091-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb21/11368710/822021fd443a/JAG-71-091-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb21/11368710/b5ad204d40c2/JAG-71-091-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb21/11368710/822021fd443a/JAG-71-091-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb21/11368710/b5ad204d40c2/JAG-71-091-g02.jpg

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本文引用的文献

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GNINA 1.0: molecular docking with deep learning.GNINA 1.0:基于深度学习的分子对接
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The O-polysaccharide from the lipopolysaccharide of Providencia stuartii O44 contains L-quinovose, a 6-deoxy sugar rarely occurring in bacterial polysaccharides.斯氏普罗威登斯菌O44脂多糖中的O-多糖含有L-奎诺糖,这是一种在细菌多糖中很少出现的6-脱氧糖。
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