Department Ecotoxicogenomics, Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Auf dem Aberg 1, 57392 Schmallenberg, Germany.
Institute for Fish and Wildlife Health, University of Bern, Laenggassstrasse 122, 3012 Bern, Switzerland.
Sci Total Environ. 2024 Nov 25;953:176026. doi: 10.1016/j.scitotenv.2024.176026. Epub 2024 Sep 3.
The transcriptomic Point of Departure (tPOD) is increasingly used in ecotoxicology to derive quantitative endpoints from RNA sequencing studies. Utilizing transcriptomic data in zebrafish embryos as a New Approach Methodology (NAM) is beneficial due to its acknowledgment as an alternative to animal testing under EU Directive 2010/63/EU. Transcriptomic profiles are available in zebrafish for various modes of action (MoA). The limited literature available suggest that tPOD values from Fish Embryo Toxicity (FET) tests align with, but are generally lower than, No Observed Effect Concentrations (NOEC) from long-term chronic fish toxicity tests. In studies with the androgenic hormone androstenedione in a Fish Sexual Development Test (FSDT), a significant shift in the sex ratio towards males was noted at all test concentrations, making it impossible to determine a NOEC (NOEC <4.34 μg/L). To avoid additional animal testing in a repetition of the FSDT and adhere to the 3Rs principle (replacement, reduction, and refinement), a modified zebrafish FET (zFET) was conducted aiming to determine a regulatory acceptable effect threshold. This involved lower concentration ranges (20 to 6105 ng/L), overlapping with the masculinization-observed concentrations in the FSDT. The tPOD analysis in zFET showed consistent results with previous FSDT findings, observing strong expression changes in androgen-dependent genes at higher concentrations but not at lower ones, demonstrating a concentration-response relationship. The tPOD values for androstenedione were determined as 24 ng/L (10th percentile), 60 ng/L (20th gene), and 69 ng/L (1st peak). The 10th percentile tPOD value in zFET was 200 times lower than the lowest concentration in the FSDT. Comparing the tPOD values to literature suggests their potential to inform on the NOEC range in FSDT tests.
转录组起点 (tPOD) 在生态毒理学中越来越多地被用于从 RNA 测序研究中得出定量终点。由于在欧盟指令 2010/63/EU 下,将斑马鱼胚胎的转录组数据用作新方法方法 (NAM) 是一种替代动物测试的方法,因此利用其数据是有益的。斑马鱼有各种作用模式 (MoA) 的转录组图谱。现有的有限文献表明,鱼类胚胎毒性 (FET) 试验的 tPOD 值与长期慢性鱼类毒性试验的无观察效应浓度 (NOEC) 一致,但通常低于后者。在鱼类性发育试验 (FSDT) 中,雄激素雄烯二酮的研究中,所有测试浓度均观察到雄性性别比例显著向雄性倾斜,以至于无法确定 NOEC(NOEC <4.34μg/L)。为了避免在鱼类性发育试验的重复试验中进行额外的动物试验,并遵守 3R 原则(替代、减少和优化),进行了改良的斑马鱼 FET(zFET)试验,旨在确定监管可接受的效应阈值。这涉及更低的浓度范围(20 至 6105ng/L),与 FSDT 中观察到的雄性化浓度重叠。zFET 中的 tPOD 分析与之前的 FSDT 结果一致,在更高浓度下观察到雄激素依赖性基因的强烈表达变化,但在较低浓度下没有观察到,表明存在浓度-反应关系。雄烯二酮的 tPOD 值分别确定为 24ng/L(第 10 个百分位数)、60ng/L(第 20 个基因)和 69ng/L(第 1 个峰)。zFET 中的第 10 个百分位数 tPOD 值比 FSDT 中最低浓度低 200 倍。将 tPOD 值与文献进行比较表明,它们有可能为 FSDT 试验中的 NOEC 范围提供信息。